| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1919930 = | 122 (1.070) | 6 (0.060) | 5/230 | NT | 5.4% | coding (569/2115 nt) | prc | tail‑specific protease Prc |
| ? | NC_002947 | 1919965 = | 97 (0.900) | coding (534/2115 nt) | prc | tail‑specific protease Prc | |||||
TTCGCCCTGGCCGAGCTGAACAAGGGTGTGGACAAGATTGACTTCACCACCAAGGAAACCTTGCTGATCGACCGCAAGGACGCGCCGTGGATGAAGAACCAGGCCGAGCTCGACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1920084‑1919930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgccaCAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTCAGCTCGGCCAGGGCGAAGTCCAGGCGTTGCTTGACGCGGTCGAGGT > NC_002947/1919965‑1920113 TTCGCCCTGGCCGAGCTGAACAAGGGTGTGGACAAGATTGACTTCACGACCAAGGAAACCTTGCTGATCGACCGCAAGGACGCGCCGTGGATAACGCGGTGGTCCGAGCTCGACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTG > 2:862283/1‑150TTCGCCCTGGCCGAGCTGAACAAGGGTGTGGACAAGATTGACTTCACCACCAAGGAAACCTTGCTGATCGACCGCAAGGACGCGCCGTGGATGAAGAACCAGGCCGAGCTCGACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTG > 1:2285813/1‑150 CCTGGCCGAGCTGAACAAGGGTGTGGACAAGATTGACTTCACCACCAAGGAAACCTTGCTGATCGACCGCAAGGACGCGCCGTGGATGAAGAACCAGGCCGAGCTCGACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCA > 2:2840009/1‑150 ACAAGATTGACTTCACCACCAAGGAAACCTTGCTGATCGACCGCAAGGACGCGCCGTGGATGAAGAACCAGGCCGAGCTCGACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGC > 2:2877152/1‑122 ACAAGATTGACTTCACCACCAAGGAAACCTTGCTGATCGACCGCAAGGACGCGCCGTGGATGAAGAACCAGGCCGAGCTCGACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGC < 1:2877152/122‑1 GACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGT > 2:347801/1‑124 GACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGT < 1:347801/124‑1 GACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCA < 1:1741345/100‑1 GACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCA > 2:1741345/1‑100 TTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTCA < 2:1133293/142‑1 TTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTCA > 1:1133293/1‑142 GCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTCAGCTCGGCCCCCCCGACGGCCAGGCGTTGCTTGACGCGGTCGA < 1:1616878/150‑1 GCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTG > 2:2072772/1‑80 GCCACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTG < 1:2072772/80‑1 CACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTC > 2:1655825/1‑105 CACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTC < 1:1655825/105‑1 CACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCAC < 2:1283550/95‑1 CACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCAC > 1:1283550/1‑95 ACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTTGTGGTGAAGTCAATCTTGTCCACACCCTTGTTCAGCTCGGCCAGGGCGAAGTCC < 1:375396/125‑1 ACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTCAGCTCGGCCAGGGCGAAGTCCAGGCGTTGCTTGACGCGGTCGAGGT > 2:759546/1‑150 ACAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTCAGCTCGGCCAGGGCGAAGTCC > 2:375396/1‑125 TTCGCCCTGGCCGAGCTGAACAAGGGTGTGGACAAGATTGACTTCACCACCAAGGAAACCTTGCTGATCGACCGCAAGGACGCGCCGTGGATGAAGAACCAGGCCGAGCTCGACGACTTGTGGCGCAAACGCGTCAAAGACGAAGTGCTGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1920084‑1919930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgccaCAAGTCGTCGAGCTCGGCCTGGTTCTTCATCCACGGCGCGTCCTTGCGGTCGATCAGCAAGGTTTCCTTGGTGGTGAAGTCAATCTTGTCCACACCCTTGTTCAGCTCGGCCAGGGCGAAGTCCAGGCGTTGCTTGACGCGGTCGAGGT > NC_002947/1919965‑1920113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |