| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2236979 = | 65 (0.570) | 9 (0.090) | 8/224 | NT | 14.6% | intergenic (+31/+97) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter |
| ? | NC_002947 | 2237036 = | 46 (0.440) | intergenic (+88/+40) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter | |||||
GGCGGTGCTGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2237133‑2236979‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTT > NC_002947/2237036‑2237180 GGCGGTGCTGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGC < 1:5872/150‑1 GCGGTGCTGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCG < 1:280964/150‑1 CGGTGCTGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGG < 2:2731750/150‑1 GGTGCTGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGG > 1:1118336/1‑150 TGCTGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCA > 1:2725611/1‑150 CCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTT > 2:478543/1‑133 CCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTT < 1:478543/133‑1 CCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTT > 1:155956/1‑132 CCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTT < 2:155956/132‑1 GGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGAGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTTGCGGGATGGCCTCCTCCCACAGGtcctgc > 1:832180/1‑144 GGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGG > 1:2596157/1‑115 GGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGG < 2:2596157/115‑1 GAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCATCCTTCAACCCTTCCGGCAACTTGCGGG > 1:779718/1‑150 ATGCCCGCGGACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGC > 1:1885148/1‑150 CCCGCGAACACCGGCGCAGCCGGTGCCAGTCACCGCGTTGGATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACC > 1:2917411/1‑150 CCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAacgatc > 2:1092593/1‑144 GCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACC < 2:779718/150‑1 TTGAATTCTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGT < 2:2917411/150‑1 TTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCA > 1:607645/1‑150 TTCGCGGGCATGCCCGCCCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCA > 2:2294459/1‑150 CGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCCACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATC < 1:983562/150‑1 CGCGGGCATGCCCGCCCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATC < 1:2294459/150‑1 GGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTT < 2:2343302/150‑1 GGCGGTGCTGCTGACCCGCAAGTTGCCGGAAGGGTTGAAGGCTGGGGAAGCCCATTGAGGCTATTACAGATCAGATGCGGTCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGCAGCCGGTGCCAGCCACCGCGTTGAATTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2237133‑2236979‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCACCGCCACCATGCTCACCGCCAACCCGATCCCGACAAAGTGGAAGGCATCGTT > NC_002947/2237036‑2237180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |