New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2236979 =65 (0.570)9 (0.090) 8/224 NT 14.6% intergenic (+31/+97) uvrB/PP_1975 uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
?NC_002947 2237036 = 46 (0.440)intergenic (+88/+40) uvrB/PP_1975 uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter

Only 100 of 102 total aligned reads displayed.

AGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCA  >  NC_002947/2236830‑2237128
                                                                                                                                                     |                                                                                                                                                     
aGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGt                                                                                                                                                       <  1:2437600/150‑1 (MQ=255)
aGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGt                                                                                                                                                       <  2:2755962/150‑1 (MQ=255)
 gcgcATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTg                                                                                                                                                      >  1:2589945/1‑150 (MQ=255)
    aacgatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGccc                                                                                                                                                   <  2:2343302‑M1/5‑1 (MQ=255)
       gatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggggcgggcaTGCCcgcg                                                                                                                                                <  1:2294459‑M1/8‑1 (MQ=255)
       gatgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggtggaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCcgcg                                                                                                                                                <  1:983562‑M1/8‑1 (MQ=255)
        aaGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGTGGGCGTGCCCGCga                                                                                                                                               >  2:1640348/1‑150 (MQ=255)
         tgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggggcgggcaTGCCCGCgaa                                                                                                                                              >  2:2294459‑M1/141‑150 (MQ=255)
         tgccttccactttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCCGCgaa                                                                                                                                              >  1:607645‑M1/141‑150 (MQ=255)
         aGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                              <  2:949695/150‑1 (MQ=255)
          gCAGTTGGAAGAGAAAATGCTGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCACTGTAGGAGCGGGCGGGCTCGCgaag                                                                                                                                             <  2:906040/150‑1 (MQ=255)
            aGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGTGGGCGTGCCCGCgaagaa                                                                                                                                           <  1:1640348/150‑1 (MQ=255)
            aGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                                           <  1:2614004/150‑1 (MQ=255)
            aGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                                           <  1:2688783/150‑1 (MQ=255)
                 actttgtcgggatcgggttggcggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCCGCGAAGAATTCaa                                                                                                                                      <  2:2917411‑M1/18‑1 (MQ=255)
                  aaGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAAc                                                                                                                                     <  2:2589945/150‑1 (MQ=255)
                   agagAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                              >  1:1606411/1‑140 (MQ=255)
                   agagAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                              <  2:1606411/140‑1 (MQ=255)
                   agagAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAAcg                                                                                                                                    <  1:123824/150‑1 (MQ=255)
                    gagaAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                                           <  1:2498415/142‑1 (MQ=255)
                    gagaAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                                           >  2:2498415/1‑142 (MQ=255)
                    gagaAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAAcgc                                                                                                                                   >  2:832180/1‑150 (MQ=255)
                     agaAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAAcgcg                                                                                                                                  <  1:305585/150‑1 (MQ=255)
                       aaaaTGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGt                                                                                                                                <  1:593754/150‑1 (MQ=255)
                       aaaaTGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGt                                                                                                                                <  2:2317030/150‑1 (MQ=255)
                                 aGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCAcc                                                                                                                      >  1:668828/1‑150 (MQ=255)
                                   ttCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCgg                                                                                                                    <  1:292851/150‑1 (MQ=255)
                                   ttCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGAGACTATATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCgg                                                                                                                    >  1:2238572/1‑150 (MQ=255)
                                       ggtgagcatggtggcggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTgc                                                                                                                <  2:779718‑M1/40‑1 (MQ=255)
                                        ccGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTgcg                                                                                                               >  2:174087/1‑150 (MQ=255)
                                               cTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGgtgt                                                                                                        >  2:2681875/1‑150 (MQ=255)
                                                     gatcgttgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                  >  2:1092593‑M1/97‑150 (MQ=255)
                                                      ggtgctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCCGCGAAGAATCCAACGCGGTGACTGGCACCGGCTGCGCCGGTGTTCGCggg                                                                                                 >  1:2917411‑M1/96‑150 (MQ=255)
                                                        gAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCGCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCa                                                                                               <  1:1097234/150‑1 (MQ=255)
                                                        gAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggctggc                                                                                                                         <  1:2301643/124‑1 (MQ=255)
                                                        gAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggctggc                                                                                                                         >  2:2301643/1‑124 (MQ=255)
                                                        gAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCa                                                                                               >  2:2725611/1‑150 (MQ=255)
                                                        gAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCa                                                                                               >  2:2752340/1‑150 (MQ=255)
                                                         gctgctgacccgcaagttgccggaagggttgaaggctggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcgTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTCCGCGGGCAt                                                                                              >  1:1885148‑M1/93‑150 (MQ=255)
                                                            cTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcc                                                                                           >  1:1006759‑M2/1‑147 (MQ=255)
                                                              gcggcgCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccg                                                                                         <  1:2895170‑M2/150‑6 (MQ=255)
                                                               cggcgCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGTGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgc                                                                                        >  2:2226303‑M2/1‑144 (MQ=255)
                                                               cggcgCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACAGGCTGCGCCGGTGTTCGCGGGCATgcccgc                                                                                        >  2:1166793‑M2/1‑144 (MQ=255)
                                                                 gcgcAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctc                                                                                      <  2:947199‑M2/150‑9 (MQ=255)
                                                                 cccgcaagttgccggaagggttgaaggatggggaagcccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTc                                                                                      >  1:779718‑M1/85‑150 (MQ=255)
                                                                           gTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGAc                                                                            >  2:1611834/1‑150 (MQ=255)
                                                                              aCGAGATTGCGGAGCTGCGGGAGCGGTTGATCAGCCGCTGAAGACGGGCACGGGCCATGTGGGAGCGGGCGTGCCCGCGAAGACTTCAACGCGGCGGCTGGCACCGGCGGCGCCGGTGTACGAGGGCGTGCCCGCTCCCACAGGGaaccg                                                                         >  2:529226/1‑146 (MQ=21)
                                                                                gagaTTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCat                                                                       <  2:668828/150‑1 (MQ=255)
                                                                                 agaTTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatc                                                                      <  1:947199/150‑1 (MQ=255)
                                                                                   aTTGCGCAGCTGCGGGCGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctg                                                                    >  1:102385/1‑150 (MQ=255)
                                                                                    ttGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctga                                                                   >  1:1905799/1‑150 (MQ=255)
                                                                                      gcgcAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatc                                                                 <  1:2681875/150‑1 (MQ=255)
                                                                                        gcAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggc                                                                                                                             >  1:2356100/1‑88 (MQ=255)
                                                                                        gcAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGtggc                                                                                                                             <  2:2356100/88‑1 (MQ=255)
                                                                                          aGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                  >  2:1460531/1‑113 (MQ=255)
                                                                                          aGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                  <  1:1460531/113‑1 (MQ=255)
                                                                                             tGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                  <  2:1582431/110‑1 (MQ=255)
                                                                                             tGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                  >  1:1582431/1‑110 (MQ=255)
                                                                                               cGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGc                                                        <  1:174087/150‑1 (MQ=255)
                                                                                                gggAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGcc                                                       >  1:1113230/1‑150 (MQ=255)
                                                                                                 ggAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                  <  2:1411247/106‑1 (MQ=255)
                                                                                                 ggAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                  >  1:1411247/1‑106 (MQ=255)
                                                                                                     cccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTcc                                                                                     >  1:2596157‑M1/49‑115 (MQ=255)
                                                                                                     cccattgaggctattacagatcagatgcggtccctgtgggagcgggcaTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTcc                                                                                     <  2:2596157‑M1/67‑1 (MQ=255)
                                                                                                        ttGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCt                                                      >  2:126095/1‑143 (MQ=255)
                                                                                                        ttGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCt                                                      <  1:126095/143‑1 (MQ=255)
                                                                                                        ttGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTAATCTGTAATAGCCTCAATggg                                               >  2:965520/1‑150 (MQ=255)
                                                                                                          gATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAAcgcg                                                                                                                                  <  2:1903588/65‑1 (MQ=255)
                                                                                                          gATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAAcgcg                                                                                                                                  >  1:1903588/1‑65 (MQ=255)
                                                                                                           aTCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCAt                                                                                              <  1:2412928/100‑1 (MQ=255)
                                                                                                           aTCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCAt                                                                                              >  2:2412928/1‑100 (MQ=255)
                                                                                                               gcagcTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTcccc                                        >  2:1118336/1‑150 (MQ=255)
                                                                                                                   cTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGcc                                    <  2:102385/150‑1 (MQ=255)
                                                                                                                   cTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACACGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCCTGCCCGCTCCCACAGGGACCGCATATGATCTGTAATAGCCTCAATGGGCTTCCCCAAcc                                    >  1:735531/1‑150 (MQ=255)
                                                                                                                    tGAAGCCGGGCGCGGGCCCTGGGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCt                                   <  1:2446352/150‑1 (MQ=255)
                                                                                                                      aaGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatctg                                                               >  1:1531089/1‑120 (MQ=255)
                                                                                                                      aaGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctgatctg                                                               <  2:1531089/120‑1 (MQ=255)
                                                                                                                        gCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCaa                               <  2:1905799/150‑1 (MQ=255)
                                                                                                                        gCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCaa                               >  1:657889/1‑150 (MQ=255)
                                                                                                                               gcgGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTATACTAGCCTCAAGGTGCTTACCCAGCCTTCAACCCTTcc                        >  2:2333956/1‑150 (MQ=25)
                                                                                                                               gcaggacctgtgggaggaggccATCCCGCAAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCTCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTcc                        >  1:832180‑M1/23‑150 (MQ=255)
                                                                                                                                cgGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGTGCATGCCCGCTCCCACAGGGACCGCATATGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCg                       <  2:2895170/150‑1 (MQ=255)
                                                                                                                                    cccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctcccacagggcccgcgcccggcttcagctgctgatcaaccgctcccgcagctgc                                  >  2:2781538‑M2/1‑75 (MQ=255)
                                                                                                                                    cccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctcccacagggcccgcgcccggcttcagctgctgatcaaccgctcccgcagctgc                                  <  1:2781538‑M2/135‑61 (MQ=255)
                                                                                                                                    cccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCaa                   >  1:2343302/1‑150 (MQ=255)
                                                                                                                                     ccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCTCGGGCATgc                                                                                            >  1:860929‑M2/1‑74 (MQ=255)
                                                                                                                                     ccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCTCGGGCATgc                                                                                            <  2:860929‑M2/76‑3 (MQ=255)
                                                                                                                                     ccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgc                                                                                            <  2:932951‑M2/76‑3 (MQ=255)
                                                                                                                                     ccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAAc                  >  2:2686037/1‑150 (MQ=255)
                                                                                                                                     ccTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTCGCCCCGCCTGCGACGATGTTCGCTGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAAc                  <  1:1137074/150‑1 (MQ=37)
                                                                                                                                           ttcgcggGCACGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctc                                                                                      >  1:2034836‑M2/4‑68 (MQ=255)
                                                                                                                                           ttcgcggGCACGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctc                                                                                      <  2:2034836‑M2/73‑9 (MQ=255)
                                                                                                                                           ggAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctcccacaggg                                                                              >  2:2359989‑M2/1‑68 (MQ=255)
                                                                                                                                           ggAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctcccacaggg                                                                              <  1:2359989‑M2/84‑17 (MQ=255)
                                                                                                                                           ggAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCgg            <  1:2752340/150‑1 (MQ=255)
                                                                                                                                               cGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctcccacagggcccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtca                      <  1:2798071‑M2/136‑73 (MQ=255)
                                                                                                                                               cGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATgcccgctcccacagggcccgcgcccggcttcagctgctgatcaaccgctcccgcagctgcgcaatctcgtca                      >  2:2798071‑M2/1‑64 (MQ=255)
                                                                                                                                                  gCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctga                                                                   <  2:2984760/88‑1 (MQ=255)
                                                                                                                                                  gCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCatctga                                                                   >  1:2984760/1‑88 (MQ=255)
                                                                                                                                                     TGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAgcagca  >  1:2725611‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGCAGTTGCGTGACGAGATTGCGCAGCTGCGGGAGCGGTTGATCAGCAGCTGAAGCCGGGCGCGGGCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATTCAACGCGGTGGCTGGCACCGGCTGCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGACCGCATCTGATCTGTAATAGCCTCAATGGGCTTCCCCAGCCTTCAACCCTTCCGGCAACTTGCGGGTCAGCAGCA  >  NC_002947/2236830‑2237128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.