New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2422987 = | 101 (0.880) | 5 (0.050) | 3/234 | NT | 5.1% | coding (1232/1248 nt) | PP_2124 | glycosyl transferase |
? | NC_002947 | 2423036 = | 90 (0.820) | coding (1183/1248 nt) | PP_2124 | glycosyl transferase |
CTGGCGCATGAGCCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2423139‑2422987 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAGTTGATCACCG > NC_002947/2423036‑2423184 CTGGCGCATGAGCCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCT > 1:943658/1‑150 GCGCATGAGCCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGG < 2:1748891/150‑1 CTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTG > 1:2288075/1‑123 CTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTG > 1:2288202/1‑123 CTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTG < 2:2288075/123‑1 CTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTG < 2:2288202/123‑1 ACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGGTGAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCG > 1:1477022/1‑150 ACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGG > 1:1822038/1‑38 ACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGG < 2:1822038/38‑1 GGGTCAGGCGTATGTGCACATTCTCCAGTCGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAGTTGATCAC < 1:426122/150‑1 GTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAGTTGATCACCG < 2:1376178/150‑1 CTGGCGCATGAGCCAGTTGAGCGATGCCGGGCGCCAGTTTGCCCGCCAGCGCCACGACTGGAGCGTGGCTGCCCAACAACTGGAGAATGTGCACATACGCCTGACCCAGGCGGCACCGGACGAGGCCGCGCCGCTGGCCAGTGCCTGGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2423139‑2422987 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggTCAGGCGTATGTGCACATTCTCCAGTTGTTGGGCAGCCACGCTCCAGTCGTGGCGCTGGCGGGCAAACTGGCGCCCGGCATCGCTCAACTGGCTCATGCGCCAGGGCTGATTGAGCAGCTGGGTGATCAGCAATGCCAGTTGATCACCG > NC_002947/2423036‑2423184 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |