New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2980458 = | 110 (0.960) | 6 (0.050) | 4/236 | NT | 5.6% | coding (232/321 nt) | PP_2606 | hypothetical protein |
? | NC_002947 | 2980493 = | 97 (0.880) | coding (197/321 nt) | PP_2606 | hypothetical protein |
ACGCCGCGCAGCCATGGCGGCAGACTCGCGCTGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2980495‑2980458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCTTTGGTACAGGGCCAGCCA > NC_002947/2980493‑2980638 ACGCCGCGCAGCCATGGCGGCAGACTCGCGCTGGGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTG < 1:1741633/88‑1 ACGCCGCGCAGCCATGGCGGCAGACTCGCGCTGGGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTG > 2:1741633/1‑88 GCCGCGCAGCCATGGCGGCAGACTCGCGCTGGGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAG < 1:552945/134‑1 GCCGCGCAGCCATGGCGGCAGACTCGCGCTGGGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAG < 1:553041/134‑1 GCCGCGCAGCCATGGCGGCAGACTCGCGCTGGGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAG > 2:552945/1‑134 GCCGCGCAGCCATGGCGGCAGACTCGCGCTGGGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAG > 2:553041/1‑134 GCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCTTTGGTACAGGGCCAGCCA > 1:2446918/1‑150 ACGCCGCGCAGCCATGGCGGCAGACTCGCGCTGGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2980495‑2980458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCTTTGGTACAGGGCCAGCCA > NC_002947/2980493‑2980638 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |