BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2980458 =	110 (0.960)	6 (0.050)	4/236	NT	5.6%	coding (232/321 nt)	PP_2606	hypothetical protein
*	?	NC_002947	2980493 =	97 (0.880)	6 (0.050)	4/236	NT	5.6%	coding (197/321 nt)	PP_2606	hypothetical protein

Only 100 of 132 total aligned reads displayed.

CATTCAAGGGGGGGCATGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACC  >  NC_002947/2980311‑2980606

caTTCAAGGGGGGGCATGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCg                                                                                                                                                    <  2:524706/150‑1 (MQ=255)

 aTTCAAGGGGGGGCATGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGc                                                                                                                                                   >  1:2011783/1‑150 (MQ=255)

 aTTCAAGGGGGGGCATGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGc                                                                                                                                                   >  2:1505777/1‑150 (MQ=255)

  tggctggccctgtaccaaagccacgcactcgaggtgcagagcgaacacctgggcaacctggtgggctttttcaccagcgagttcggcgacgtcaaccaagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgccgc                                                                                                                                                   >  1:2446918‑M1/147‑150 (MQ=255)

      aGGGGGGGCATGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAgc                                                                                                                                              >  1:2702960/1‑150 (MQ=255)

             gCATGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCGCCT‑CCGGGTTGCTCCGCGGGAATCCGCCCCAGcccgcgcc                                                                                                                                       >  2:392584/1‑146 (MQ=255)

              cATGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCt                                                                                                                                      <  2:25913/150‑1 (MQ=255)

               aTGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTg                                                                                                                                     >  1:1357915/1‑150 (MQ=255)

                    aGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCt                                                                                                                                      <  1:1884911/144‑1 (MQ=255)

                    aGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCt                                                                                                                                      >  2:1884911/1‑144 (MQ=255)

                        gTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATgg                                                                                                                            <  1:1216127/150‑1 (MQ=255)

                          ccGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCt                                                                                                                          <  1:169285/150‑1 (MQ=255)

                             cTCGGATGTTGGAAGAAGAGGCGTTTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTgcg                                                                                                                       >  2:1725131/1‑150 (MQ=255)

                                   tGTTGGAAGAAGTGGCGTGTGGCTTACTGTAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                 <  1:1648221/150‑1 (MQ=255)

                                   tGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                 <  2:2917319/150‑1 (MQ=255)

                                       ggAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCa                                                                                                             >  1:2318445/1‑150 (MQ=255)

                                        gaagaaGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCAt                                                                                                            >  1:1499472/1‑150 (MQ=255)

                                         aagaagTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATg                                                                                                           <  2:1499472/150‑1 (MQ=255)

                                           gaagTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCg                                                                                                                                                    >  1:73393/1‑107 (MQ=255)

                                              gTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtc                                                                                                      >  2:2500015/1‑150 (MQ=255)

                                              gTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtc                                                                                                      <  1:1116463/150‑1 (MQ=255)

                                                ggCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCg                                                                                                                                                    >  1:41072/1‑102 (MQ=255)

                                                ggCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCg                                                                                                                                                    <  2:41072/102‑1 (MQ=255)

                                                  ctgggcaacctggtgggctttttcaccagcgagttcggcgacgtcaaccaagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCgcggc                                                                                                                   >  2:553041‑M1/99‑134 (MQ=255)

                                                  ctgggcaacctggtgggctttttcaccagcgagttcggcgacgtcaaccaagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCgcggc                                                                                                                   <  1:553041‑M1/36‑1 (MQ=255)

                                                  ctgggcaacctggtgggctttttcaccagcgagttcggcgacgtcaaccaagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCgcggc                                                                                                                   <  1:552945‑M1/36‑1 (MQ=255)

                                                     gtgGCTTACTGCAGCGGTGAGAACCCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAgg                                                                                               <  1:2185560/150‑1 (MQ=255)

                                                       ggCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCt                                                                                             <  1:302032/150‑1 (MQ=255)

                                                        gCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTg                                                                                            >  2:1629144/1‑150 (MQ=255)

                                                        gCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTg                                                                                            <  1:2736962/150‑1 (MQ=255)

                                                        gCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTg                                                                                            >  2:2054213/1‑150 (MQ=255)

                                                         cTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTgg                                                                                           >  2:76670/1‑150 (MQ=255)

                                                          ttACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtcgtc                                                                                                   >  2:2408268/1‑141 (MQ=255)

                                                          ttACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtcgtc                                                                                                   <  1:2408268/141‑1 (MQ=255)

                                                              tGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                 >  1:463028/1‑123 (MQ=255)

                                                              tGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAg                                                                                      >  2:2045933/1‑150 (MQ=255)

                                                               gCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTgcc                                                                                                                                   <  2:801737/104‑1 (MQ=255)

                                                                 aGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCTCCAGGGCTGCG‑CTCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGccc                                                                                   <  1:1725131/150‑1 (MQ=255)

                                                                 aGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCa                                                                                                                               <  2:1092251/106‑1 (MQ=255)

                                                                 aGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCa                                                                                                                               >  1:1092251/1‑106 (MQ=255)

                                                                 aGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGccc                                                                                   <  1:1629144/150‑1 (MQ=255)

                                                                   cGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCa                                                                                 <  2:1879516/150‑1 (MQ=255)

                                                                        agaAACCGGTCGGGCGCAGCCGTCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGAtgt                                                                            <  2:670864/150‑1 (MQ=255)

                                                                          aaaCCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGAGGTCGTCGAGGCTGGCATAGCCCCAGATGTGc                                                                          >  2:1748831/1‑150 (MQ=255)

                                                                          aaaCCGGTCGGGCGCAGCAGCCGCGATTGCAGGAGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGGCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGc                                                                          >  1:1779334/1‑150 (MQ=255)

                                                                           aaCCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGca                                                                         <  2:2318445/150‑1 (MQ=255)

                                                                                     gcgcAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGtt                                                               <  1:3042950/150‑1 (MQ=255)

                                                                                                gcgATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGa                                                                                                                                          <  1:542030/64‑1 (MQ=255)

                                                                                                gcgATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGa                                                                                                                                          >  2:542030/1‑64 (MQ=255)

                                                                                                gcgATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGGCGTCGCCGa                                                    >  2:2523028/1‑150 (MQ=255)

                                                                                                  caagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                 >  2:1741633‑M1/51‑88 (MQ=255)

                                                                                                  caagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                 <  1:1741633‑M1/38‑1 (MQ=255)

                                                                                                    ttGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTc                                                >  2:2347811/1‑150 (MQ=255)

                                                                                                        aGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCg                                                                                                         >  2:2311790/1‑89 (MQ=255)

                                                                                                        aGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTg                                            <  1:2347811/150‑1 (MQ=255)

                                                                                                        aGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGACTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTg                                            <  1:2184481/150‑1 (MQ=255)

                                                                                                          gcgcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGc                                                                                                               >  1:1761936/1‑81 (MQ=255)

                                                                                                          gcgcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGc                                                                                     >  1:1306385/1‑107 (MQ=255)

                                                                                                          gcgcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGt                                          >  2:1949606/1‑150 (MQ=255)

                                                                                                            gcAGTACCGCGCCCAGCT‑AGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGa                                        >  2:276069/1‑150 (MQ=255)

                                                                                                              aGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAgcg                                                                                                                                             >  2:570412/1‑47 (MQ=255)

                                                                                                                tACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGc                                                       <  2:1167010/131‑1 (MQ=255)

                                                                                                                 aCCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCGTGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGGGAAAAAg                                   >  1:1111147/1‑150 (MQ=255)

                                                                                                                  ccGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGc                                  >  1:875370/1‑150 (MQ=255)

                                                                                                                   cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCTATGGCTGCGCGGCGTg                                                                                                                >  2:487201/1‑71 (MQ=255)

                                                                                                                   cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                 <  2:2104913/70‑1 (MQ=255)

                                                                                                                   cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                 >  1:2104913/1‑70 (MQ=255)

                                                                                                                   cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGcac                                                                        >  1:1236831/1‑111 (MQ=255)

                                                                                                                   cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGcac                                                                        <  2:1236831/111‑1 (MQ=255)

                                                                                                                   cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTg                                                              <  2:2194030/121‑1 (MQ=255)

                                                                                                                   cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTg                                                              >  1:2194030/1‑121 (MQ=255)

                                                                                                                   cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGcc                                 >  1:1473811/1‑150 (MQ=255)

                                                                                                                      gcCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCccac                              >  1:1131004/1‑150 (MQ=255)

                                                                                                                        ccAGCT‑CGCGGTTCCGTAGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGCCGTCCCGCCTGGCATACCCCCAGACTTGCACCCCTTCGTCGCCCTCGCCCAACTCGCTGGTGAAAATGCccacaa                            >  2:385328/1‑148 (MQ=255)

                                                                                                                         cAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAg                           <  2:2702960/150‑1 (MQ=255)

                                                                                                                          aGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAgg                          <  1:76670/150‑1 (MQ=255)

                                                                                                                            cT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTgg                                                                 >  2:294560/1‑109 (MQ=255)

                                                                                                                            cT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTgg                                                                 <  1:294560/109‑1 (MQ=255)

                                                                                                                            cT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGtt                        <  1:2500015/150‑1 (MQ=255)

                                                                                                                            cT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGtt                        >  2:1606934/1‑150 (MQ=255)

                                                                                                                             t‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTg                       >  1:1776451/1‑150 (MQ=255)

                                                                                                                                 cgGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGccc                    <  1:2299085/150‑1 (MQ=255)

                                                                                                                                   gTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCATGTTGCCCAg                  <  2:2163001/150‑1 (MQ=255)

                                                                                                                                     tGCTTCGCTAGAATTCCGTCCAGCGAGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGTCTCCTATGTGCACTACTTGGTTGACGTCGCCGAACTCGCTGGTGAATAAGCCCACCAGGTTGCCCAGgt                <  2:2130728/150‑1 (MQ=255)

                                                                                                                                      gCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGgt                >  2:744792/1‑149 (MQ=255)

                                                                                                                                      gCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGgt                <  1:744792/149‑1 (MQ=255)

                                                                                                                                        gTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGtt             >  2:2117292/1‑150 (MQ=255)

                                                                                                                                           gcgAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAAc                                                  <  1:2333179/110‑1 (MQ=255)

                                                                                                                                           gcgAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAAc                                                  >  2:2333179/1‑110 (MQ=255)

                                                                                                                                             gagaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGcac                                                                        >  1:2804200/1‑86 (MQ=255)

                                                                                                                                             gagaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGcac                                                                        <  2:2804200/86‑1 (MQ=255)

                                                                                                                                              agaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGAGATCggaag       >  1:2970128/1‑146 (MQ=255)

                                                                                                                                               gaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTg      <  2:1357915/150‑1 (MQ=255)

                                                                                                                                                aaTTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGc     <  1:2117292/150‑1 (MQ=255)

                                                                                                                                                aaTTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGc     <  2:2157194/150‑1 (MQ=255)

                                                                                                                                                  ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGAtgt                                                                            >  1:2061760/1‑77 (MQ=255)

                                                                                                                                                  ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGAtgt                                                                            <  2:2061760/77‑1 (MQ=255)

                                                                                                                                                  ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCAc   <  1:1606934/150‑1 (MQ=255)

                                                                                                                                                  ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCAc   >  2:1685869/1‑150 (MQ=255)

                                                                                                                                                  ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTAGCTGGTG‑AAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCAcc  >  1:1963507/1‑150 (MQ=255)

CATTCAAGGGGGGGCATGGAAGGGGTCCGCTCGGATGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACC  >  NC_002947/2980311‑2980606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.