New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3211691 =	100 (0.870)	7 (0.060)	5/230	NT	7.1%	coding (685/1254 nt)	PP_2815	hypothetical protein
	?	NC_002947	3211718 =	89 (0.820)					coding (712/1254 nt)	PP_2815	hypothetical protein

ATTGCCGCGCGTATCTTCGGAAATTGCCGGGCGACGTCCTGCAGCAGGTTCAGGTCCAGCGGCTTTGCCGCATTGCTCCAGGCCCACAGGGTCGCAGGGCCCGCGAATACGATCAGCGGCGCTACCGTGCCCGTGAGCTGCGCCAGGGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3211842‑3211691 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcacgGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGCAATCGGTTCGGCGGGCGCGGGGATGAA  >  NC_002947/3211718‑3211866                                                                                                                                                                                                                                                                                                                ATTGCCGCGCGTATCTTCGGAAATTGCCGGGCGACGTCCTGCAGCAGGTTCAGGTCCAGCGGCTTTGCCGCATTGCTCCAGGCCCACAGGGTCGCAGGGCCCGCGAATACGATCAGCGGCGCTACCGTGCCCGTGAGCTGCGCCAGGGCA                                                                                                                                                          >  2:1671063/1‑150                                                                                                                           TACCGTGCCCGTGAGCTGCGCCAGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTG                                                                                   <  1:2607405/99‑1                                                                                                                           TACCGTGCCCGTGAGCTGCGCCAGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTG                                                                                   >  2:2607405/1‑99                                                                                                                           TACCGTGCCCGTGAGCTGCGCCAGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCATGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTG                                                                       >  1:2836151/1‑111                                                                                                                           TACCGTGCCCGTGAGCTGCGCCAGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCATGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTG                                                                       <  2:2836151/111‑1                                                                                                                             tCGTGCCCGTGAGCTGCGCCAGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGC                             >  1:978473/2‑150                                                                                                                              CGTGCCCGTGAGCTGCGCCAGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGACCGGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGCA                            >  2:2122829/1‑150                                                                                                                               GTGCCCGTGAGCTGCGCCAGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACATTCAGCCTG‑AATTTCCGAAGATACGCGCGGCAA                           >  1:1541944/1‑150                                                                                                                                                  GGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGGGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGCAATCGGTTCGGCGGGCGCGGG        >  1:1914439/1‑150                                                                                                                                                  GGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGCAATCGGTTCGGCGGGCGCGGG        >  1:2632187/1‑150                                                                                                                                                  GGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGCAATCGGTTCGGCGGGCGCGGG        <  2:238271/150‑1                                                                                                                                                    GCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGCAATCGGTTCGGCGGGCGCGGGGA      <  2:1960832/150‑1                                                                                                                                                     CACGGTAGCGCCGCTGATCGTATTCGCGGGCCGTGCGACGCTGGGGGCCGGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGCAATCGGTTCGGCGGGCGCGGGGAT     >  2:1887803/1‑150                                                                                                                                                        GGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATTTGCTCGGCAATCGGTTCGGCGGGCGCGGGGATGAA  <  1:2122829/150‑1                                                                                                                                                                                                                                                                                                                ATTGCCGCGCGTATCTTCGGAAATTGCCGGGCGACGTCCTGCAGCAGGTTCAGGTCCAGCGGCTTTGCCGCATTGCTCCAGGCCCACAGGGTCGCAGGGCCCGCGAATACGATCAGCGGCGCTACCGTGCCCGTGAGCTGCGCCAGGGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3211842‑3211691 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcacgGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGAC‑GTCGCCCGGCAATTTCCGAAGATACGCGCGGCAATCGGTTCGGCGGGCGCGGGGATGAA  >  NC_002947/3211718‑3211866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.