New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3211691 =100 (0.870)7 (0.060) 5/230 NT 7.1% coding (685/1254 nt) PP_2815 hypothetical protein
?NC_002947 3211718 = 89 (0.820)coding (712/1254 nt) PP_2815 hypothetical protein

Only 100 of 125 total aligned reads displayed.

CCTGGTCAGCCGGCTGCTCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATACGCGCGGC  >  NC_002947/3211543‑3211839
                                                                                                                                                     |                                                                                                                                                    
ttcatccccgcgcccgccgaaccgattgccgagcaaatcttcggaaattgccgggcgacgtcctgcagcaggttcaggtccagcggctttgccgcattgctccaggcccacagggtcgcagggcccgcgaatacgatcagcggcgctacc                                                                                                                                                      <  1:2122829‑M1/1‑1 (MQ=255)
ccTGGTCAGCCGGCTGCTCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTAAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGcgcg                                                                                                                                                     >  2:2549418/1‑150 (MQ=255)
   atccccgcgcccgccgaaccgattgccgcgcgtatcttcggaaattgccgggcgacgtcctgcagcaggttcaggtccagcggctttgccgcattgctcccggcccccagcgtcgcacggcccgcgaatacgatcagcggcgctacCGTg                                                                                                                                                   >  2:1887803‑M1/147‑150 (MQ=255)
    tccccgcgcccgccgaaccgattgccgcgcgtatcttcggaaattgccgggcgacgtcctgcagcaggttcaggtccagcggctttgccgcattgctccaggcccacagggtcgcagggcccgcgaatacgatcagcggcgctacCGTGc                                                                                                                                                  <  2:1960832‑M1/5‑1 (MQ=255)
      cccgcgcccgccgaaccgattgccgcgcgtatcttcggaaattgccgggcgacgtcctgcagcaggttcaggtccagcggctttgccgcattgctccaggcccacagggtcgcagggcccgcgaatacgatcagcggcgctacCGTGccc                                                                                                                                                <  2:238271‑M1/7‑1 (MQ=255)
         ccGGCTGCTCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGGCTGGGCTACAGCGTGGCTCAGAGGAACCAAACCTCACTAGACTGATTTTTATCGCCTTTCTGCTAGATTGGCCCCCTGGAAGACATGGCGCGTGCCCTGgc                                                                                                                                            <  1:835751/150‑1 (MQ=255)
          cGGCTGCTCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGgcg                                                                                                                                           >  2:418342/1‑150 (MQ=255)
            gctgctCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCa                                                                                                                                         <  2:126176/150‑1 (MQ=255)
              tgctCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGgc                                                                                                                                            <  2:2020576/145‑1 (MQ=255)
              tgctCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGc                                                                                                                                       >  1:1671063/1‑150 (MQ=255)
                 tCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCa                                                                                                                                    >  1:2749740/1‑150 (MQ=255)
                   gATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACg                                                                                                                                  >  1:1889113/1‑150 (MQ=255)
                         ttgccgcgcgtatcttcggaaattcaggctgaatgtcctgcagcaggttcaggtccagcggctttgccgcattgctccaggcccacagggtcgcagggcccgcgaatacgatcagcggcgctacCGTGCCCTGGCGCAGCTCACGGGCAc                                                                                                                             >  1:1541944‑M1/125‑150 (MQ=255)
                           ggATGTGGACGCGGAGCAGTGCGGCAGGCGACTGGGCTACAGCCTAGCTCAGAAGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGAGGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACggg                                                                                                                          >  1:3006057/1‑149 (MQ=255)
                           gccgcgcgtatcttcggaaattgccgggcgacgtcctgcagcaggttcaggtccagcggctttgccgcattgctccaggcccacagggtcgcagggcccgcgaatacgatcagcggcgctacCGTGCCCTGGCGCAGCTCACGGGCAcga                                                                                                                           >  1:978473‑M1/123‑149 (MQ=255)
                            gATGTGGACGCGGAGTAGTTCGGGCGGCGACTGGGCTACATCCGGGCTCAGAGGCACCATGCCTGGACGTAGGGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTa                                                                                                                         <  1:533414/150‑1 (MQ=255)
                            gATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTa                                                                                                                         <  1:418342/150‑1 (MQ=255)
                                 ggACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGcgcc                                                                                                                    >  2:2071044/1‑150 (MQ=255)
                                                  gCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCgg                                                                                                   >  1:1953499/1‑150 (MQ=255)
                                                  gCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCgg                                                                                                   >  2:2388144/1‑150 (MQ=255)
                                                    aGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACgg                                                                                                                                 >  1:1746871/1‑118 (MQ=255)
                                                    aGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACgg                                                                                                                                 <  2:1746871/118‑1 (MQ=255)
                                                         aCTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGc                                                                                            <  2:155359/150‑1 (MQ=255)
                                                         aCTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGc                                                                                            >  2:1325876/1‑150 (MQ=255)
                                                              gCTACAGCCTGCCTCAGAGGCACCATGCCTCCCTCGTCTAGACCGAAAACCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGTACGGTCGCGCCGCTGGTCGTATTCGCGGGCCCTGCGAccc                                                                                       >  2:2905154/1‑150 (MQ=255)
                                                                tACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCCGGAAGACATGGCGCGt                                                                                                                                                    <  2:1517440/87‑1 (MQ=255)
                                                                tACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCCGGAAGACATGGCGCGt                                                                                                                                                    >  1:1517440/1‑87 (MQ=255)
                                                                   aGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTgg                                                                                  >  2:1252436/1‑150 (MQ=255)
                                                                    caggttcaggtccagcggctttgccgcattgctccaggcccacatggtcgcagggcccgcgaatacgatcagcggcgctacCGTGCCCTGGCGCAGCTCACGGGCACGGTa                                                                                                                         >  1:2836151‑M1/82‑111 (MQ=255)
                                                                    caggttcaggtccagcggctttgccgcattgctccaggcccacatggtcgcagggcccgcgaatacgatcagcggcgctacCGTGCCCTGGCGCAGCTCACGGGCACGGTa                                                                                                                         <  2:2836151‑M1/30‑1 (MQ=255)
                                                                     ccTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGccc                                                                                                                                                >  2:1984964/1‑86 (MQ=255)
                                                                     ccTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGccc                                                                                                                                                <  1:1984964/86‑1 (MQ=255)
                                                                       tGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCt                                                                              >  1:2209969/1‑150 (MQ=255)
                                                                       tGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCt                                                                              <  1:669937/150‑1 (MQ=255)
                                                                        ggCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTg                                                                             <  2:1832314/150‑1 (MQ=255)
                                                                        ggCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTg                                                                             <  2:1953499/150‑1 (MQ=255)
                                                                         gCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACgg                                                                                                                           <  1:784481/103‑1 (MQ=255)
                                                                         gCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACgg                                                                                                                           >  2:784481/1‑103 (MQ=255)
                                                                          cTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGGGCCCTGGCGCAGCTCACGGCCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGa                                                                           >  1:2218938/1‑150 (MQ=255)
                                                                           tCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAg                                                                          >  1:1551021/1‑150 (MQ=255)
                                                                           tCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAg                                                                          >  2:2248026/1‑150 (MQ=255)
                                                                            cAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAg                                                                          <  2:2490108/149‑1 (MQ=255)
                                                                            cAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAg                                                                          >  1:2490108/1‑149 (MQ=255)
                                                                            cAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGc                                                                         >  2:1727873/1‑150 (MQ=255)
                                                                              gagGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGCTTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCaa                                                                       >  1:1042297/1‑150 (MQ=255)
                                                                              gagGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCaa                                                                       >  2:368498/1‑150 (MQ=255)
                                                                               agGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAAt                                                                      <  1:2549418/150‑1 (MQ=255)
                                                                                cagcggctttgccgcattgctccaggcccacagggtcgcagggcccgcgaatacgatcagcggcgctacCGTGCCCTGGCGCAGCTCACGGGCACGGTa                                                                                                                         <  1:2607405‑M1/30‑1 (MQ=255)
                                                                                cagcggctttgccgcattgctccaggcccacagggtcgcagggcccgcgaatacgatcagcggcgctacCGTGCCCTGGCGCAGCTCACGGGCACGGTa                                                                                                                         >  2:2607405‑M1/70‑99 (MQ=255)
                                                                                 gCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGCCCCTGTGGGCCTGGAGCAATGc                                                                    <  1:2559933/150‑1 (MQ=255)
                                                                                 gCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTg                                                                             <  1:2792953/141‑1 (MQ=255)
                                                                                 gCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTg                                                                             >  2:2792953/1‑141 (MQ=255)
                                                                                 gCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGc                                                                    >  1:2469973/1‑150 (MQ=255)
                                                                                 gCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGc                                                                    >  2:2400005/1‑150 (MQ=255)
                                                                                  cACCATGCCTGCCTCGTCTGGAGCCAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCg                                                                   <  1:2789714/150‑1 (MQ=255)
                                                                                    ccATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTAt                                                                                                         <  1:137053/110‑1 (MQ=255)
                                                                                    ccATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGc                                                                 <  2:812916/150‑1 (MQ=255)
                                                                                       tgcctgccTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGc                                                                 >  1:2563587/1‑147 (MQ=255)
                                                                                       tgcctgccTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGc                                                                 <  2:2563587/147‑1 (MQ=255)
                                                                                          ctgcctCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGcc                                                           >  1:1634617/1‑150 (MQ=255)
                                                                                           tgcctCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGc                                                                                                                                                  >  1:1069736/1‑62 (MQ=255)
                                                                                           tgcctCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGc                                                                                                                                                  <  2:1069736/62‑1 (MQ=255)
                                                                                              ctCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCGCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTg                                                       <  1:1573227/150‑1 (MQ=255)
                                                                                               tCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTgg                                                      >  2:1841711/1‑150 (MQ=255)
                                                                                                cGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGa                                                     <  1:1252436/150‑1 (MQ=255)
                                                                                                 gTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGAc                                                    >  1:2776852/1‑150 (MQ=255)
                                                                                                 gTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGAc                                                    <  2:2776852/150‑1 (MQ=255)
                                                                                                        aGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAAc                                              <  2:1634411/150‑1 (MQ=255)
                                                                                                        aGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAAc                                              <  2:179911/150‑1 (MQ=255)
                                                                                                              cccccGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACctgctg                                        >  2:2105644/2‑150 (MQ=255)
                                                                                                              aCCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACctgctg                                        <  1:2445815/150‑1 (MQ=255)
                                                                                                                cccGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCa                                      >  1:330950/1‑150 (MQ=255)
                                                                                                                cccGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCCACCCTGTCGGCCTGGAGCAATGCGGCAAAGCCGCTGGCCCTGACCCtgctgcc                                      >  2:1197934/1‑149 (MQ=255)
                                                                                                                 ccGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTgg                                                                                  <  1:473083/105‑1 (MQ=255)
                                                                                                                 ccGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAg                                     <  1:2248026/150‑1 (MQ=255)
                                                                                                                 ccGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAg                                     <  2:1659191/150‑1 (MQ=255)
                                                                                                                  cGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGc                                                                                            >  1:401282/1‑94 (MQ=255)
                                                                                                                  cGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGc                                                                                            <  2:401282/94‑1 (MQ=255)
                                                                                                                   ggACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCTTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGa                                   >  1:1318365/1‑150 (MQ=255)
                                                                                                                        ccGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTg                                                       <  1:1519533/125‑1 (MQ=255)
                                                                                                                        ccGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTg                                                       >  2:1519533/1‑125 (MQ=255)
                                                                                                                         cGAGATTCGCCCCCTGGAATACATGGCGCGTGCCCTGGCGCAGCTCACGGGCAc                                                                                                                             <  1:2857462/54‑1 (MQ=255)
                                                                                                                         cGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAAc                                              >  1:1375902/1‑133 (MQ=255)
                                                                                                                         cGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAAc                                              <  2:1375902/133‑1 (MQ=255)
                                                                                                                         cGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGc                             >  2:2025959/1‑150 (MQ=255)
                                                                                                                         cGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGc                             >  1:1960832/1‑150 (MQ=255)
                                                                                                                                       tGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGa               <  1:201663/150‑1 (MQ=255)
                                                                                                                                         gAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGctttgc                                                            <  1:1907636/103‑6 (MQ=255)
                                                                                                                                         gAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGctttgc                                                            >  2:1907636/1‑98 (MQ=255)
                                                                                                                                            gACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATa          >  1:1120917/1‑150 (MQ=255)
                                                                                                                                             aCATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATAc         >  2:2843941/1‑150 (MQ=255)
                                                                                                                                             aCATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATAc         <  2:1042297/150‑1 (MQ=255)
                                                                                                                                               aTGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATAcgc       >  1:1680803/1‑150 (MQ=255)
                                                                                                                                               aTGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATAcgc       >  2:680350/1‑150 (MQ=255)
                                                                                                                                                tGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATAcgcg      >  1:769645/1‑150 (MQ=255)
                                                                                                                                                  gcgcGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGa                                                                           >  1:1748448/1‑79 (MQ=255)
                                                                                                                                                  gcgcGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATAcgcgcg    >  1:1091882/1‑150 (MQ=255)
                                                                                                                                                   ggcgTGCCCCGGCGCAGCTCACGGGCACGGTACCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAACTTCCGAAGATACGCGCgg   <  2:782124/149‑1 (MQ=255)
                                                                                                                                                    gcgTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATACGCGCGGc  >  1:596420/1‑150 (MQ=255)
                                                                                                                                                    gcgTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATACGCGCGGc  >  1:239163/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CCTGGTCAGCCGGCTGCTCGATGGCAGGGATGTGGACGCGGAGCAGTTCGGCAGGCGACTGGGCTACAGCCTGGCTCAGAGGCACCATGCCTGCCTCGTCTGGAGCGAAACCCCGGACGCCGAGATTCGCCCCCTGGAAGACATGGCGCGTGCCCTGGCGCAGCTCACGGGCACGGTAGCGCCGCTGATCGTATTCGCGGGCCCTGCGACCCTGTGGGCCTGGAGCAATGCGGCAAAGCCGCTGGACCTGAACCTGCTGCAGGACGTCGCCCGGCAATTTCCGAAGATACGCGCGGC  >  NC_002947/3211543‑3211839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.