New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4450528 | 139 (1.210) | 8 (0.070) | 6/232 | NT | 5.6% | coding (88/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
? | NC_002947 | = 4450543 | 136 (1.250) | coding (103/3564 nt) | nicB | nicotinate dehydrogenase subunit B |
CTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4450378‑4450528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccct‑TGGCCACAG‑GGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAGGAT < NC_002947/4450543‑4450397 CTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCC < 1:2797460/150‑1 GCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCT‑TGGCCACAG‑GGCCTGAGGGCGGG < 1:1632149/150‑1 GCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCT‑TGGCCACAG‑GGCCTGAGGGCGGG < 2:2993962/150‑1 CGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCACGCCCT‑TGGCCACAG‑GGCCTGAGGGCGGGG < 1:1364554/150‑1 CGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCACGCCCT‑TGGCCACAG‑GGCCTGAGGGCGGG < 1:167425/129‑1 CGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCACGCCCT‑TGGCCACAG‑GGCCTGAGGGCGGG > 2:167425/1‑129 GTCGACCAGATCACCCCGCCCTCAGGCC‑CTGTGGCC‑AAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCAT < 1:2597255/125‑1 GTCGACCAGATCACCCCGCCCTCAGGCC‑CTGTGGCC‑AAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCAT > 2:2597255/1‑125 TCGACCAGATCACCCCGCCCTCAGGCC‑CTGTGGCC‑AAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTAGGGCAACAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCG > 1:833702/1‑150 CGCCCT‑TGGCCACAG‑GGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAG > 2:1700851/1‑150 CGCCCT‑TGGCCACAG‑GGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAG < 2:2976495/150‑1 CCCT‑TGGCCACAG‑GGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAGGA < 2:2860893/150‑1 CCT‑TGGCCACAG‑GGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAGGAT < 1:2277938/150‑1 CCT‑TGGCCACAG‑GGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTG < 1:216470/73‑1 CCT‑TGGCCACAG‑GGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTG > 2:216470/1‑73 CTGCGGCACCCACGTCGAAATCCTGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4450378‑4450528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccct‑TGGCCACAG‑GGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGCAGGAT < NC_002947/4450543‑4450397 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |