| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4845173 = | 50 (0.440) | 6 (0.060) | 5/212 | NT | 14.7% | intergenic (+14/‑123) | PP_4260/PP_4261 | hypothetical protein/cation‑transporting P‑type ATPase |
| ? | NC_002947 | 4845266 = | 26 (0.260) | intergenic (+107/‑30) | PP_4260/PP_4261 | hypothetical protein/cation‑transporting P‑type ATPase | |||||
GACGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845337‑4845173‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGG > NC_002947/4845266‑4845413 GACGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTG < 1:2282271/150‑1 CGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCC < 1:476014/150‑1 CGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCC < 2:2346813/150‑1 GGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGC > 2:1730064/1‑130 GGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGC > 2:1730495/1‑130 GGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGC < 1:1730064/130‑1 GGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGC < 1:1730495/130‑1 TGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGC > 2:115687/1‑150 GGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGGTTCCTATCTGCCTGAGCAGTGTACAGCTTATGACCCAACGGACCTCCTGCTAACACGGCGCCCTGCCC > 1:1452109/1‑150 CCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTA > 2:2519436/1‑104 CCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTA < 1:2519436/104‑1 CCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTC > 2:3005642/1‑97 CCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTC < 1:3005642/97‑1 CGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGG > 1:102217/1‑63 CGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGG < 2:102217/63‑1 GCCCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGG > 1:1280296/1‑150 CCGCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCT > 1:2420860/1‑150 GCTCCCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGT < 2:891765/150‑1 CCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGGCGCTTCACCGCCG < 1:722013/105‑1 CCACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGGCGCTTCACCGCCG > 2:722013/1‑105 CACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGC > 2:1340666/1‑150 CACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGC > 2:1389881/1‑150 ACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTAC > 2:2028004/1‑60 ACAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTAC < 1:2028004/60‑1 CAGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGG > 1:1354569/1‑150 AGGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGT < 1:115687/150‑1 GGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTGTTCGCCCGTGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG < 2:2282271/150‑1 GGGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTG < 1:2484743/150‑1 GGTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGG < 1:1340666/150‑1 GACGGGCAGGGCGCAGTGGTAGCAGGGGGTCGGTTGGGTCATAGGGCAGACACTGCTCAGGCAGATAGGAAACCCTGTGGGAGCGGGCGCGCCCGCGAATGCGTCAGACCTGGAAATACCTTTGCCTGAGCTATCGCATTCGCGGGCGTGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4845337‑4845173‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggTTTCCTATCTGCCTGAGCAGTGTCTGCCCTATGACCCAACCGACCCCCTGCTACCACTGCGCCCTGCCCGTCCCCACCGGCAGCCGCTTCACCGCCGTGGTCCTCGGCCAGCCCCGGCAGTTCTGCTGCCCCGGCTGTCAGGCGGTGG > NC_002947/4845266‑4845413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |