| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5033687 | 0 (0.000) | 3 (0.030) | 3/226 | NT | 100% | coding (78/336 nt) | PP_4438 | transposase |
| ? | NC_002947 | = 5036691 | NA (NA) | coding (134/336 nt) | PP_4442 | transposase | |||||
GTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5033530‑5033687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcccggCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCCG < NC_002947/5036691‑5036544 GTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCAT > 1:850148/1‑150GTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCAT < 1:2265412/150‑1GTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCAT < 1:1924939/150‑1GTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCAT < 1:1924211/150‑1 ccaCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTG < 1:581792/147‑1 GCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGACGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGG < 2:2217823/150‑1 CCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGC < 2:1380684/150‑1 CCGGGCAAGTGATCACGGTGAAATGGCCAGCCTAGGTTCCCTAGGGTTGTTTGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCAATGCCATCTGGCTGGTCACCGAGACGATGGACATGCGCGCTGGCACCGAGACAGCATTGGC < 2:2850777/150‑1 CGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCACCGATCCCCATCCACGCCCCCTGCCCGGCCCCCGACCCGATGCACATGCGCGCTGCCACCGAGACAGCATTGGCC < 2:186329/150‑1 CGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCC > 1:1609331/1‑150 CGGGCAAGTGATCACGGTGAAATGACCTGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCC > 1:2093167/1‑150 GGGCAAGTGGTTGCGGTGAAATGGCCAGACTCGGATCCCGAGGATTGTGCGCTATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCC > 2:1653031/1‑150 GGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATT < 1:1758727/144‑1 GGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATT > 2:1758727/1‑144 CAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCCGGa < 2:2106926/150‑2 AAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATT < 1:2145566/141‑1 AAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATT > 2:2145566/1‑141 GTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGG < 2:1363139/132‑1 GTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGG > 1:1363139/1‑132 TGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTG < 2:1630328/125‑1 TGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTG > 1:1630328/1‑125 CGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCCGG > 1:536229/1‑114 CGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCCGG < 2:536229/114‑1 TTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTAGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCG > 2:2309239/1‑150 TTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCAT > 2:2359707/1‑100 TTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCAT < 1:2359707/100‑1 CGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTAGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCAATCACCC < 1:2309239/150‑1 GGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCC < 2:2605423/89‑1 GGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCC > 1:2605423/1‑89 CGCTCAATGATCCGCATCGATGCGATCTGGCTGGCCACCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAAT < 2:1681925/150‑1 TGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCC > 1:358684/1‑51 TGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCC < 2:358684/51‑1 GGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACA < 2:1743323/150‑1 CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAGAACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCGAGATCGCATCGATGCGGACCATTGAGCGACAGCC > 2:538430/1‑150 CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCC < 1:2559450/150‑1 CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTCAGCGACGGCC > 2:1753302/1‑150 CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGC > 2:1177752/1‑83 CCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGC < 1:1177752/83‑1 CGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCC < 1:6829/150‑1 CGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCAATGCGGATCATTGAGCGACAGCCC > 1:52094/1‑150 GGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCCATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGGGCGACAGCCCG > 1:264049/1‑150 GGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCCG > 2:537250/1‑150 GGCGATTGCCAAACAGCTAGGCACAGTGCGGCTTCGCCGCACCGAACACCGGGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCCG < 2:1473624/150‑1 GTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5033530‑5033687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcccggCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAATGCCGTTTCGGTGCCGGCGCGCATATCCATCGGCTCGGTGGCCAGCCAGATCGCATCGATGCGGATCATTGAGCGACAGCCCG < NC_002947/5036691‑5036544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |