New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5336764 | 95 (0.830) | 5 (0.040) | 4/240 | NT | 5.1% | coding (166/1443 nt) | PP_4696 | nitrogen regulation protein NR(I) |
? | NC_002947 | = 5336783 | 91 (0.810) | coding (185/1443 nt) | PP_4696 | nitrogen regulation protein NR(I) |
CGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5336638‑5336764 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcTCGGTGCCGGGCGCGCCGGGCAGGCGCAGGTCGCTGACGATGAGGTCGAAAGTGGCAATGCTGAAGCGTTCCTGGGCTTCCTGCACCGAGCCGGCCTCGCTGACCTGGTACTGGTTCCGCTCAAGCAGGCGACGCAGGGCCGAGCGGA < NC_002947/5336783‑5336636 CGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCTCGGTGCCGGGCGCGCCGGGCAG < 1:2478820/150‑1 GTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCTCGGTGCCGGGCGCGCCGGGCAGG > 1:2881989/1‑91 GTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCTCGGTGCCGGGCGCGCCGGGCAGG < 2:2881989/91‑1 TTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCTCGGTGCCGGGCGCGCCGGGCAG < 1:2288120/69‑1 TTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCTCGGTGCCGGGCGCGCCGGGCAG > 2:2288120/1‑69 GCTCGGTGCCGGGCGCGCCGGGCAGGCGCAGGTCGCTGACGATGAGGTCGAAAGTGGCAATGCTGAAGCGTTCCTGGGCTTCCTGCACCGAGCCGGCCTCGCTGACCTGGTACTGGTTCCGCTCAAGCAGGCGACGCAGGGCCGAGCGGA > 1:792898/1‑150 GCTCGGTGCCGGGCGCGCCGGGCAGGCGCAGGTCGCTGACGATGAGGTCGAAAGTGGCAATGCTGAAGCGTTCCTGGGCTTCCTGCACCGAGCCGGCCTCGCTGACCTGGTACTGGTTCCGCTCAAGCAGGCGACGCAGGGCCGAGCGGA > 2:605818/1‑150 CGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5336638‑5336764 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcTCGGTGCCGGGCGCGCCGGGCAGGCGCAGGTCGCTGACGATGAGGTCGAAAGTGGCAATGCTGAAGCGTTCCTGGGCTTCCTGCACCGAGCCGGCCTCGCTGACCTGGTACTGGTTCCGCTCAAGCAGGCGACGCAGGGCCGAGCGGA < NC_002947/5336783‑5336636 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |