BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5336764	95 (0.830)	5 (0.040)	4/240	NT	5.1%	coding (166/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
*	?	NC_002947	= 5336783	91 (0.810)	5 (0.040)	4/240	NT	5.1%	coding (185/1443 nt)	PP_4696	nitrogen regulation protein NR(I)

Only 100 of 115 total aligned reads displayed.

GAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATG  >  NC_002947/5336620‑5336913

gAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGGGAGGTACGCCTGCCCGgc                                                                                                                                                   >  2:2091389/1‑150 (MQ=255)

    aCGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGgcgcgc                                                                                                                                               >  2:1296419/1‑150 (MQ=255)

      gAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGAATCCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGccc                                                                                                                                             >  1:191708/1‑150 (MQ=255)

        aaCCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGGGCGGAACCAGTACCAGTTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCgg                                                                                                                                           >  1:1755881/1‑150 (MQ=255)

        aaCCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCgg                                                                                                                                           >  1:1117152/1‑150 (MQ=255)

        aaCCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCgg                                                                                                                                           >  2:1176907/1‑150 (MQ=255)

           catcatCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCAc                                                                                                                                        <  2:818459/150‑1 (MQ=255)

                tCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAgc                                                                                                                                   >  1:792898‑M2/1‑148 (MQ=255)

                 ccGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑t                                                                                                                                 >  1:551852/1‑150 (MQ=255)

                 ccGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑t                                                                                                                                 <  2:2976432/150‑1 (MQ=255)

                  cGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCtcggtgccgggcgcgccgggcag                                                                                                                                 <  1:2478820‑M1/150‑24 (MQ=255)

                   gCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGa                                                                                                                               >  2:597319/1‑150 (MQ=255)

                              cGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTTGATC‑AGCTCggt                                                                                                                    <  1:207956/150‑2 (MQ=255)

                                 cGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAg                                                                                                                 <  1:1176907/150‑1 (MQ=255)

                                 cGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAg                                                                                                                 <  1:1296419/150‑1 (MQ=255)

                                  gCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAgg                                                                                                                <  1:597319/150‑1 (MQ=255)

                                    cTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGc                                                                                                              >  2:583847/1‑150 (MQ=255)

                                                aaCCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTg                                                                                                  <  2:1117152/150‑1 (MQ=255)

                                                aaCCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGAGCCTAAAACAACCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTg                                                                                                  >  2:1619425/1‑150 (MQ=255)

                                                  ccAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGAt                                                                                                >  1:1378070/1‑150 (MQ=255)

                                                  ccAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGAt                                                                                                <  2:1174077/150‑1 (MQ=255)

                                                  ccAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGAt                                                                                                >  1:799140/1‑150 (MQ=255)

                                                   cAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATc                                                                                               >  1:2200666/1‑150 (MQ=255)

                                                    aGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCa                                                                                              >  1:2466172/1‑150 (MQ=255)

                                                     gTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGGACCGAGC‑TGATCAAGCTCGGGCAGGGCACCCCGGTGCTGATCAt                                                                                             <  2:2171692/150‑1 (MQ=255)

                                                      tACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGT‑TGAGCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATg                                                                                            >  1:939382/1‑150 (MQ=255)

                                                       aCCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGa                                                                                           <  2:1684669/150‑1 (MQ=255)

                                                       aCCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGa                                                                                           <  1:72105/150‑1 (MQ=255)

                                                        ccAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGAc                                                                                          <  2:551852/150‑1 (MQ=255)

                                                         cAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGAcc                                                                                         <  2:939382/150‑1 (MQ=255)

                                                          aGGTCAGCGAGGCCGGCTCGGTGCAGGAAGTCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCa                                                                                        <  1:268779/150‑1 (MQ=255)

                                                          aGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCa                                                                                        >  2:2762230/1‑150 (MQ=255)

                                                                        ggCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAAGGCACCCCGGTGGTGATCATGACGAGTTACGCCAGCCTg                                                                          >  1:1140377/1‑150 (MQ=255)

                                                                              gTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCtcggtgccgggcgcgccgggcagg                                                                                                                                >  1:2881989‑M1/1‑67 (MQ=255)

                                                                              gTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCtcggtgccgggcgcgccgggcagg                                                                                                                                <  2:2881989‑M1/91‑25 (MQ=255)

                                                                                 cAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCg                                                                 <  1:1849706/150‑1 (MQ=255)

                                                                                   ggAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                               >  2:623435/1‑150 (MQ=255)

                                                                                   ggAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                               <  1:623435/150‑1 (MQ=255)

                                                                                    gAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCa                                                                                        >  1:2686383/1‑124 (MQ=255)

                                                                                    gAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTg                                                              <  2:1378070/150‑1 (MQ=255)

                                                                                      aGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGa                                                            <  1:75237/150‑1 (MQ=255)

                                                                                         ccAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTc                                                         <  2:140619/150‑1 (MQ=255)

                                                                                           aGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATc                                                                                                                             >  2:783198/1‑80 (MQ=255)

                                                                                           aGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATc                                                                                                                             <  1:783198/80‑1 (MQ=255)

                                                                                           aGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCATTCAAGGTCGTATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGa                                                       <  1:2091389/150‑1 (MQ=255)

                                                                                            ggAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTTCGCCAGCCTGCGCTCAGCGGTGGACTCGAt                                                      <  1:1619425/150‑1 (MQ=255)

                                                                                            ggAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTg                                                              <  1:2268203/142‑1 (MQ=255)

                                                                                            ggAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTg                                                              >  2:2268203/1‑142 (MQ=255)

                                                                                                   ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCtcggtgccgggcgcgccgggcag                                                                                                                                 <  1:2288120‑M1/69‑24 (MQ=255)

                                                                                                   ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCtcggtgccgggcgcgccgggcag                                                                                                                                 >  2:2288120‑M1/1‑46 (MQ=255)

                                                                                                   ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGa                                                       <  1:134166/142‑1 (MQ=255)

                                                                                                   ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGa                                                       >  2:134166/1‑142 (MQ=255)

                                                                                                   ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATg                                               >  2:571939/1‑150 (MQ=255)

                                                                                                   ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATg                                               >  1:2556035/1‑150 (MQ=255)

                                                                                                   ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCATGCGCTCAGCGGTGGACTCGATGAAAATg                                               >  1:2775650/1‑150 (MQ=255)

                                                                                                    tCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCg                                                                                                                                            >  1:1345944/1‑57 (MQ=255)

                                                                                                    tCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCg                                                                                                                                            <  2:1345944/57‑1 (MQ=255)

                                                                                                    tCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATgg                                              <  1:571939/150‑1 (MQ=255)

                                                                                                    tCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTAGGCCAGGGCACCCCGGTGATTGTCTTGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATgg                                              <  1:2382780/150‑1 (MQ=255)

                                                                                                     cAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGaaa                                                  >  1:945980/1‑145 (MQ=255)

                                                                                                             ccACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                               <  1:2082957/124‑1 (MQ=255)

                                                                                                             ccACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                               >  2:2082957/1‑124 (MQ=255)

                                                                                                              cACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCTTCGGTGGACTCGATGAAAATGGGCGCGGTGGa                                    <  1:728180/150‑1 (MQ=255)

                                                                                                              cACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                               >  1:2482700/1‑123 (MQ=255)

                                                                                                              cACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                               <  2:2482700/123‑1 (MQ=255)

                                                                                                              cACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATgg                                              >  1:2816271/1‑140 (MQ=255)

                                                                                                              cACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATgg                                              <  2:2816271/140‑1 (MQ=255)

                                                                                                              cACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGa                                    <  2:2775650/150‑1 (MQ=255)

                                                                                                              cACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGa                                    <  1:567470/150‑1 (MQ=255)

                                                                                                                cTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACt                                  <  2:2466172/150‑1 (MQ=255)

                                                                                                                 tttCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCa                                                                                                                                         >  2:876267/1‑47 (MQ=255)

                                                                                                                 tttCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCa                                                                                                                                         <  1:876267/47‑1 (MQ=255)

                                                                                                                 tttCGACCTCATCGTCAGCGACCTGCGCCTGCCCGCCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTa                                 >  1:3019675/1‑150 (MQ=255)

                                                                                                                     gACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGAc                                                           <  1:1806299/120‑1 (MQ=255)

                                                                                                                     gACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATc                             <  1:2762230/150‑1 (MQ=255)

                                                                                                                        cTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCa                                                                                              <  1:375929/82‑1 (MQ=255)

                                                                                                                        cTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCa                                                                                              >  2:375929/1‑82 (MQ=255)

                                                                                                                        cTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGAATCCATGAAAATGGGCGCGGTCGACTACATCGcc                          >  2:1245237/1‑150 (MQ=255)

                                                                                                                          cATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCaa                        >  1:873688/1‑150 (MQ=255)

                                                                                                                               tCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCt                   >  1:1833121/1‑150 (MQ=255)

                                                                                                                                 ggCGACCTGCGCCTGCCCGGCGAGCACGGCAAAGAGC‑TGATCAAGCTCGGCCGGGGCACCACAGTGCTGATCATGACCAGTGACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTc                 <  2:2941464/149‑1 (MQ=255)

                                                                                                                                  gCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCCTGACCAGCTACGACAGCCTTCGCTCAGCGGTGGACGCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCg                >  2:343307/1‑150 (MQ=255)

                                                                                                                                  gCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCg                >  1:2964725/1‑150 (MQ=255)

                                                                                                                                   cGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGa               >  2:1931315/1‑150 (MQ=255)

                                                                                                                                    gACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGAc              <  2:1833121/150‑1 (MQ=255)

                                                                                                                                      cccgcgcCTGCCCGGCTCGCCCGGCACACAGT‑TGATCAAGCTCGCCCAAGGCACCCCGGTGCTGATCATGACCAGTTACTCCAGCCTGCGCTCAGCGGTCGACTCCATGAAAATGGGCGCGGTGGACTACATCGACAAGCCCTTCGACCa            <  2:1140377/147‑1 (MQ=255)

                                                                                                                                      ccTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCa            <  1:2499487/150‑1 (MQ=255)

                                                                                                                                       cTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCac           >  2:1995364/1‑150 (MQ=255)

                                                                                                                                         gcgcCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCacga         >  1:601340/1‑150 (MQ=255)

                                                                                                                                          cgcCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCacgac        <  2:191708/150‑1 (MQ=255)

                                                                                                                                            ccTGCCCGGCGCGCCCGGCACCGAgcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaagcgttcctgggcttcctgcac                                                                  >  1:2881989‑M2/1‑24 (MQ=255)

                                                                                                                                            ccTGCCCGGCGCGCCCGGCACCGAgcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaagcgttcctgggcttcctgcac                                                                  <  2:2881989‑M2/91‑68 (MQ=255)

                                                                                                                                            ccTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCAcgacga      <  2:873688/150‑1 (MQ=255)

                                                                                                                                             cTGCCCGGCGCGCCCGGCACCGAgcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaagcgttcctgggcttcctgcaccgagccggcctcgctgacctggtactggttccgctcaagcaggcgacgcagggccgagcg      <  1:2478820‑M2/150‑128 (MQ=255)

                                                                                                                                             cTGCCCGGCGCGCCCGGCACCGAgcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaa                                                                                       >  2:2288120‑M2/1‑23 (MQ=255)

                                                                                                                                              tGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACgaga    >  1:897903/1‑150 (MQ=255)

                                                                                                                                              tGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACgaga    >  2:2280684/1‑150 (MQ=255)

                                                                                                                                              tGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACgaga    >  2:1470956/1‑150 (MQ=255)

                                                                                                                                               gCtcggtgccgggcgcgccgggcaggcgcaggtcgctgacgatgaggtcgaaagtggcaatgctgaagcgttcctgggcttcctgcaccgagccggcctcgctgacctggtactggttccgctcaagcaggcgacgcagggccgagcgga    >  2:605818‑M1/1‑2 (MQ=255)

                                                                                                                                                cccGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGAtg  >  1:2052851/1‑150 (MQ=255)

GAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGC‑TGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATG  >  NC_002947/5336620‑5336913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.