New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5385875	91 (0.790)	5 (0.050)	5/234	NT	5.2%	coding (558/1146 nt)	lldD	L‑lactate dehydrogenase
	?	NC_002947	= 5385891	96 (0.870)					coding (574/1146 nt)	lldD	L‑lactate dehydrogenase

CTTCATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5385722‑5385875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatgCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGCGC  <  NC_002947/5385891‑5385743                                                                                                                                                                                                                                                                                                                 CTTCATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGC                                                                                                                                                           >  1:958445/1‑150    CATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCAT                                                                                                                                                        <  2:2068138/150‑1     ATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAATAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG                                                                                                                                                       >  1:2449327/1‑150          CAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG                                                                                                                                                       <  1:2742419/145‑1          CAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG                                                                                                                                                       >  2:2742419/1‑145                 CTGGAGCGCACAACGGCGACCAGCGTGAAGATCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCAGGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGT                                                                                                                                           <  1:2204968/150‑1                                  CGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCAT                                                                                                                                                        >  1:2854163/1‑120                                  CGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCAT                                                                                                                                                        <  2:2854163/120‑1                                                                                                   CCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGTGGGTCATGGC                                                                                                                                 <  1:2853184/78‑1                                                                                                   CCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGTGGGTCATGGC                                                                                                                                 >  2:2853184/1‑78                                                                                                                             GGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGTGGGTCAT                                                                                                                                    >  1:1434956/1‑49                                                                                                                             GGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGTGGGTCAT                                                                                                                                    <  2:1434956/49‑1                                                                                                                                                      CCATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGC      >  1:2798122/1‑150                                                                                                                                                      CCATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGC      <  2:527623/150‑1                                                                                                                                                       CATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCG     >  2:817601/1‑150                                                                                                                                                        ATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGC    >  2:788702/1‑150                                                                                                                                                        ATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGC    <  1:1106730/150‑1                                                                                                                                                          GCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGCGC  <  2:1029244/150‑1                                                                                                                                                                                                                                                                                                                 CTTCATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5385722‑5385875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatgCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGCGC  <  NC_002947/5385891‑5385743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.