New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6076376 = | 113 (0.990) | 6 (0.060) | 6/228 | NT | 5.9% | coding (242/2289 nt) | PP_5328 | phosphate ABC transporter permease |
? | NC_002947 | 6076413 = | 86 (0.800) | coding (205/2289 nt) | PP_5328 | phosphate ABC transporter permease |
CCGCATGCGCGCCCTCAAGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6076531‑6076376 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctggaACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTATTGAAA > NC_002947/6076413‑6076561 CCGCATGCGCGCCCTCGAGGACCGCCTGACCCGCAGGCATGTGCTGGTAGGCGGGCTTGCCGCATTGGCGGCAATCCCGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGC > 2:270391/1‑150 GCATGCGCGCCCTCAAGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCC > 1:158843/1‑150 GCATGCGCGCCCTCAAGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCC < 1:2193488/150‑1 GCGCGCCCTCAAGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGA > 1:27278/1‑150 AGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGC < 2:2897096/133‑1 AGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGC > 1:2897096/1‑133 CCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCT < 1:1360201/123‑1 CCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCT > 2:1360201/1‑123 ACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAGCAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAA > 2:465137/1‑97 ACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAGCAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAA < 1:465137/97‑1 TGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTT < 1:2824898/143‑1 TGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTT > 2:2824898/1‑143 TTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCG > 2:1670065/1‑150 GCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGG < 1:1670065/150‑1 CCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCA > 2:1168520/1‑82 CCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCA < 1:1168520/82‑1 CCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTAT > 2:2223184/1‑150 TGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGACGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTATTG > 1:2394730/1‑150 GAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCG > 2:1446312/1‑99 GAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCG < 1:1446312/99‑1 AACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTATTGAAA < 2:1802862/150‑1 CCGCATGCGCGCCCTCAAGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6076531‑6076376 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctggaACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTATTGAAA > NC_002947/6076413‑6076561 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |