BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	874287 =	92 (0.800)	7 (0.070)	7/200	NT	10.9%	intergenic (+21/‑138)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
*	?	NC_002947	874351 =	39 (0.420)	7 (0.070)	7/200	NT	10.9%	intergenic (+85/‑74)	PP_0758/PP_0759	hypothetical protein/hypothetical protein

Only 100 of 127 total aligned reads displayed.

CCGGACACGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGT  >  NC_002947/874138‑874428

ccGGACACGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCtt                                                                                                                                               >  1:2658138/1‑150 (MQ=255)

 cGGACACGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCttt                                                                                                                                              >  1:71340/1‑150 (MQ=255)

    gccagcaggatgccagcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTcgc                                                                                                                                           >  1:3040566‑M1/146‑150 (MQ=255)

    gccagcaggatgccagcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTcgc                                                                                                                                           >  1:2116196‑M1/146‑150 (MQ=255)

    acacGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTcgc                                                                                                                                           <  2:71340/150‑1 (MQ=255)

     cacGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTcgcg                                                                                                                                          <  2:1007828/150‑1 (MQ=255)

      cagcaggatgccagcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCgg                                                                                                                                         >  2:892767‑M1/144‑150 (MQ=255)

      cagcaggatgccagcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCgg                                                                                                                                         >  1:2784323‑M1/144‑150 (MQ=255)

      cagcaggatgccagcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCgg                                                                                                                                         >  1:174354‑M1/144‑150 (MQ=255)

      acGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCgg                                                                                                                                         <  1:346813/150‑1 (MQ=255)

      acGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCgg                                                                                                                                         <  2:1818581/150‑1 (MQ=255)

      acGCCGATTACACGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCgg                                                                                                                                         <  2:1351830/150‑1 (MQ=255)

        gcaggatgccagcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGc                                                                                                                                       <  2:2589465‑M1/9‑1 (MQ=255)

        gCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGc                                                                                                                                       >  2:1197735/1‑150 (MQ=255)

        gCCGATTACCCGCTTGCACGAGCTGCTGGCAAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGGCGGCCCTTTcgcgagg                                                                                                                                       >  2:1511267/1‑147 (MQ=255)

         caggatgccagcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCa                                                                                                                                      <  1:86507‑M1/10‑1 (MQ=255)

            aTTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGc                                                                                                                                   >  1:1485858/1‑150 (MQ=255)

             ttACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGcc                                                                                                                                  <  2:1950678/150‑1 (MQ=255)

                ccagcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGc                                                                                                                               <  2:1463596‑M1/17‑1 (MQ=255)

                 ccGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCt                                                                                                                              >  1:777477/1‑150 (MQ=255)

                  cGCTTGCACGAGCTGCTGGCCAGCCCACCAGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTc                                                                                                                             <  1:2809948/150‑1 (MQ=255)

                   gcactcagcaggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGCTcc                                                                                                                            <  1:2125973‑M1/20‑1 (MQ=255)

                    cctGCGCGGGCTGATGGCCAGTCCACCGGCGACTTTGCGTGAGCGGGCTTTGGCCAATTTCGTCAATGACCCGAAGCTAGATGCGCCGCAATGTCCTACCCCTGCTCGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCTTGCCCGcgaaa                                                                                                                           <  2:1293964/148‑5 (MQ=255)

                    cTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCACTTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCt                                                                                                                           >  2:1952935/1‑150 (MQ=255)

                     tctcagcaggctgatgaccaacgtcttacacatgaaatcagtccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGCTCCTa                                                                                                                          >  2:807361‑M1/129‑150 (MQ=255)

                           caggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTc                                                                                                                                             <  2:619140‑M1/3‑1 (MQ=255)

                           caggctgatgacaaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTc                                                                                                                                             >  1:619140‑M1/123‑125 (MQ=255)

                              gctgatgacaaaagacttacgcatgaaaacactccctctgcacatgagccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagatttgcgtcgcctgaaccggcctcTTCGCGGGCACGCCCGctactacacggataa                                                                                                                 <  2:316796‑M1/31‑8 (MQ=255)

                               tgctgGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCgt                                                                                                                >  2:77732/1‑150 (MQ=255)

                               tgctgGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCgt                                                                                                                <  1:381896/150‑1 (MQ=255)

                                 ctgGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCgtgt                                                                                                              <  1:2076931/150‑1 (MQ=255)

                                  tgGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGtt                                                                                                             >  1:1889517/1‑150 (MQ=255)

                                  tgGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGtt                                                                                                             >  2:1829447/1‑150 (MQ=255)

                                   ggCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATTGTGttt                                                                                                            >  2:1918892/1‑149 (MQ=255)

                                   ggCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTa                                                                                                            <  2:932993/150‑1 (MQ=255)

                                      cAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGTAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTAccc                                                                                                         <  2:215165/150‑1 (MQ=255)

                                       aaaagacttacgcatgaaaacactccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTAcccc                                                                                                        <  1:2798646‑M1/40‑1 (MQ=255)

                                         cccACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTa                                                                                                                          >  1:1414780/1‑130 (MQ=255)

                                         cccACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTa                                                                                                                          <  2:1414780/130‑1 (MQ=255)

                                          ccACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCttt                                                                                                     <  2:777477/150‑1 (MQ=255)

                                                gCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGc                                                                                               >  2:1993493/1‑150 (MQ=255)

                                                  gACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCttt                                                                                                                                              >  2:1564484/1‑101 (MQ=255)

                                                  gACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCgg                                                                                             <  2:2097118/150‑1 (MQ=255)

                                                   aCGTTGCGTGAGCGGGCGTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCggg                                                                                            <  1:430559/150‑1 (MQ=255)

                                                   aCGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCggg                                                                                            <  2:2155199/150‑1 (MQ=255)

                                                   aCGTTGCGTGAGCGCAGCTTGGCCAATTTCGTCAATCACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGCGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCggg                                                                                            <  1:633102/150‑1 (MQ=39)

                                                    cGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGc                                                                                           <  1:1993493/150‑1 (MQ=255)

                                                        gCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGc                                                                                       <  2:1485858/150‑1 (MQ=255)

                                                               ccctatccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGaa                                                                                >  2:2752330‑M1/87‑150 (MQ=255)

                                                                 ggCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAaga                                                                              <  1:1829447/150‑1 (MQ=255)

                                                                    cTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGc                                                                           >  1:2430227/1‑150 (MQ=255)

                                                                     ccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGc                                                                                           >  1:783741‑M1/81‑133 (MQ=255)

                                                                     ccacatgcgccgtatcctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGc                                                                                           <  2:783741‑M1/53‑1 (MQ=255)

                                                                      tGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCg                                                                         <  2:2430227/150‑1 (MQ=255)

                                                                          cAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGc                                                                                                                                   <  2:2486079/88‑1 (MQ=255)

                                                                          cAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGc                                                                                                                                   >  1:2486079/1‑88 (MQ=255)

                                                                          cAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTc                                                                     >  2:1852828/1‑150 (MQ=255)

                                                                             tttCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAgg                                                                  <  1:1539023/150‑1 (MQ=255)

                                                                                 gTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATc                                                                                                                  <  1:1542763/98‑1 (MQ=255)

                                                                                  tCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTcgc                                                                                                                                           <  1:981984/72‑1 (MQ=255)

                                                                                     ctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTcg                                                                                                                                            <  2:915328‑M1/4‑1 (MQ=255)

                                                                                     ctaggccgagtcgccagtggctgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTcg                                                                                                                                            >  1:915328‑M1/65‑68 (MQ=255)

                                                                                         cccGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCt                                                      >  1:634504/1‑150 (MQ=255)

                                                                                          ccGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTa                                                                                                    <  2:552657/103‑1 (MQ=255)

                                                                                            gAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTc                                                                                                                             >  2:659310/1‑76 (MQ=255)

                                                                                              aGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCg                                                                         >  2:332574/1‑126 (MQ=255)

                                                                                               gCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTg                                                <  1:1197735/150‑1 (MQ=255)

                                                                                                          tgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCgg                                                                                                                                         >  2:2688890‑M1/44‑50 (MQ=255)

                                                                                                          tgccatagccgcagggaagattttcgtcgcctgaaccggcctcTTCGCgg                                                                                                                                         <  1:2688890‑M1/7‑1 (MQ=255)

                                                                                                            gAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTGGCGGGCAAGCCGGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCGGGTCGAGGCGACGAAACTCTTCCCTGCGGCTATGGCAGc                                   >  1:316796/1‑150 (MQ=38)

                                                                                                                 tCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTa                                                                                                    <  2:1729344/80‑1 (MQ=255)

                                                                                                                 tCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTa                                                                                                    >  1:1729344/1‑80 (MQ=255)

                                                                                                                   ttACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGc                            >  1:2858186/1‑150 (MQ=255)

                                                                                                                   cgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCgg                                                                                             >  2:2681938‑M1/35‑85 (MQ=255)

                                                                                                                   cgcagggaagattttcgtcgcctgaaccggcctcTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCgg                                                                                             <  1:2681938‑M1/51‑1 (MQ=255)

                                                                                                                     aCCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGTGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCATGCGGCTATGGCAGCCACTGGCGa                          >  1:1179885/1‑150 (MQ=255)

                                                                                                                       cccTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACt                        >  2:1085197/1‑150 (MQ=255)

                                                                                                                        ccTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTc                       <  1:1852828/150‑1 (MQ=255)

                                                                                                                         cTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCg                                                                         <  2:1812786/99‑1 (MQ=255)

                                                                                                                         cTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCtt                                                     <  1:720763/119‑1 (MQ=255)

                                                                                                                            cTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGc                                                                                               >  1:312752/1‑74 (MQ=255)

                                                                                                                            cTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGc                                                                                               <  2:312752/74‑1 (MQ=255)

                                                                                                                                 tGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGa              >  1:2225415/1‑150 (MQ=255)

                                                                                                                                       gCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGCGGACGGTTCAg                                                                   >  1:1135855/1‑91 (MQ=255)

                                                                                                                                           tgCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCcgc                                                                                   <  2:659398/71‑1 (MQ=255)

                                                                                                                                           tgCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCcgc                                                                                   >  1:659398/1‑71 (MQ=255)

                                                                                                                                             ccGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCgtgt                                                                                                              <  1:1522234/42‑1 (MQ=255)

                                                                                                                                             ccGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCgtgt                                                                                                              >  2:1522234/1‑42 (MQ=255)

                                                                                                                                             ccGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCa                                     <  2:486058/115‑1 (MQ=255)

                                                                                                                                             ccGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCa                                     >  1:486058/1‑115 (MQ=255)

                                                                                                                                             ccGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCAtgt  >  1:1783780/1‑150 (MQ=255)

                                                                                                                                              cGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGc                                                                           <  2:157754/76‑1 (MQ=255)

                                                                                                                                              cGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGc                                                                           >  1:157754/1‑76 (MQ=255)

                                                                                                                                              cGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTa                                          >  1:2165241/1‑109 (MQ=255)

                                                                                                                                              cGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTa                                          <  2:2165241/109‑1 (MQ=255)

                                                                                                                                              cGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACgg         >  1:3069187/1‑142 (MQ=255)

                                                                                                                                              cGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACgg         <  2:3069187/142‑1 (MQ=255)

                                                                                                                                                gCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGccc                                                                                     <  2:2776053/64‑1 (MQ=255)

                                                                                                                                                     TTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATg                                        <  1:663691‑M1/104‑1 (MQ=255)

                                                                                                                                                     TTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATg                                        >  2:663691‑M1/1‑104 (MQ=255)

CCGGACACGCCGATTACCCGCTTGCACGAGCTGCTGGCCAGCCCACCGGCGACGTTGCGTGAGCGGGCCTTGGCCAATTTCGTCAATGACCCGAAGCTGGATGCGCCGGAGTGTCTTACCCCTGCTTGATGGGGGGCTGTGCCGGCCCTTTCGCGGGCAAGCCCGCTCCTACAATGATCGTGTTACCCCTTTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTTCAGGCGACGAAAATCTTCCCTGCGGCTATGGCAGCCACTGGCGACTCGGCCTAGGATACGGCGCATGT  >  NC_002947/874138‑874428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.