New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 207829960 (0.520)14 (0.140) 12/210 NT 21.6% intergenic (+41/+74) PP_1853/PP_1854 LysR family transcriptional regulator/hypothetical protein
?NC_002947 = 2078346 50 (0.510)intergenic (+88/+27) PP_1853/PP_1854 LysR family transcriptional regulator/hypothetical protein

Only 100 of 105 total aligned reads displayed.

CACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGT  >  NC_002947/2078154‑2078445
                                                                                                                                                 |                                                                                                                                                  
cacaAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCAccc                                                                                                                                                >  2:2510250/1‑150 (MQ=255)
  caAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCcac                                                                                                                                              >  2:209829/1‑150 (MQ=255)
     gCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAgg                                                                                                                                           <  2:2609238/150‑1 (MQ=255)
       tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTCAACGCTGTATGGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGa                                                                                                                                         <  1:2091061/150‑1 (MQ=255)
        gTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGat                                                                                                                                        <  2:1448914/150‑1 (MQ=255)
        cgatctgggcaagacCCGGGCGTTCATCGATTTTGTGGTGGCGCCCTCCATGCGGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggac                                                                                                                                        <  2:2384547‑M1/144‑13 (MQ=255)
          tGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGatat                                                                                                                                      <  1:209829/150‑1 (MQ=255)
           gCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCAcc                                                                                                                                                 >  2:531381/1‑138 (MQ=255)
           gCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCAcc                                                                                                                                                 <  1:531381/138‑1 (MQ=255)
             cGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcac                                                                                                                                   >  2:699217/1‑150 (MQ=255)
              gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcaca                                                                                                                                  <  2:1855239/150‑1 (MQ=255)
               ggCAAGACCCGGGCGTTCATCGATTTTGGGCGGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccagatcg                                                                                                                                 >  1:2384547‑M1/1‑131 (MQ=255)
                gCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGc                                                                                                                                <  2:2703714/150‑1 (MQ=255)
                     aCCCGGGCGTTCATCGATTTTGTTGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGa                                                                                                                           >  1:2585557/1‑150 (MQ=255)
                      cccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                          <  1:1934207/150‑1 (MQ=255)
                      cccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa                                                                                                                          <  1:586897/150‑1 (MQ=255)
                       ccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAg                                                                                                                         >  2:1280734/1‑150 (MQ=255)
                        cGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCTGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAg                                                                                                                                            >  1:2926156/1‑130 (MQ=255)
                        cGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAg                                                                                                                                            <  2:2926156/130‑1 (MQ=255)
                         gggCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGAc                                                                                                                       <  1:2780330/150‑1 (MQ=255)
                           gCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAg                                                                                                                     <  1:2510250/150‑1 (MQ=255)
                             gTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                   <  2:391918/150‑1 (MQ=255)
                             gTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                   <  2:1607639/150‑1 (MQ=255)
                             gTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                   >  1:1347661/1‑150 (MQ=255)
                             gTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCACACCCACAGGGATATCAAAGCCATGAAGaacgtg                                                                                                                   >  2:1273290/1‑145 (MQ=255)
                              ttCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAACCCTGCAGACAGttg                                                                                                                  >  1:328662/1‑148 (MQ=255)
                              ttCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCACGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGata                                                                                                                                       >  2:810349/1‑129 (MQ=255)
                              ttCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCACGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGata                                                                                                                                       <  1:810349/129‑1 (MQ=255)
                               tCATCGATTTTGTTGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggg                                                                                                                 <  2:2585557/150‑1 (MQ=255)
                               tCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggg                                                                                                                 <  1:1280734/150‑1 (MQ=255)
                               tCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCAACCACAGGGATATCACAGCCCTGAAGACAGTggg                                                                                                                 <  1:2316802/150‑1 (MQ=255)
                               tCATCGATTTTGTAGTGGAGCAGTTTGCCTAGCAGGTGCTGGCAGGGCGCTTCTCTGCCCTGCTCCCCCTTTAGAGAACTATTTCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggg                                                                                                                 <  1:995107/150‑1 (MQ=255)
                                cATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTgggg                                                                                                                <  1:1273290/150‑1 (MQ=255)
                                 aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatat                                                                                                               >  1:257394‑M1/1‑113 (MQ=255)
                                 aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatat                                                                                                               >  1:815168‑M1/1‑113 (MQ=255)
                                 aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGt                                                                                                               >  1:1796296/1‑150 (MQ=255)
                                  tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcaca                                                                                                                                  <  2:3024602/130‑1 (MQ=255)
                                  tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggg                                                                                                                 >  2:2133766/1‑147 (MQ=255)
                                  tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                   <  1:2885664/145‑1 (MQ=255)
                                  tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                   >  2:2885664/1‑145 (MQ=255)
                                       tttGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTTGATGCCCTGCAGGCCCTTTAGAGAATTCTTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtgt                                                                                                         <  2:240877/150‑1 (MQ=255)
                                       tttGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtgt                                                                                                         <  1:2620406/150‑1 (MQ=255)
                                         tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGTCTGAACCGGCCTCTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg                                                                                                       <  2:168135/150‑1 (MQ=39)
                                         tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg                                                                                                       <  1:1803809/150‑1 (MQ=255)
                                           tggtggAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGa                                                                                                     <  2:1796296/150‑1 (MQ=255)
                                             gtggAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGGTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                   >  1:1606422/1‑134 (MQ=255)
                                               ggAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgg                                                                                                 <  2:70766‑M1/150‑52 (MQ=255)
                                                  gCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcg                                                                                              <  1:2634127‑M2/150‑8 (MQ=255)
                                                   cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgg                                                                                             <  2:815168‑M1/150‑56 (MQ=255)
                                                   cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                                             >  1:606496‑M2/1‑142 (MQ=255)
                                                   cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                                             >  1:2514459‑M2/1‑142 (MQ=255)
                                                     gTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggc                                                                                           <  1:787038‑M1/150‑58 (MQ=255)
                                                       ttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggccc                                                                                         >  2:2634127‑M2/1‑138 (MQ=255)
                                                        tGCCGAGCAGGGGCTGGCGGGCCGGTTCGATGCCCTGCAGGGTCTTTAGAGAATTATTGCATGTGCCGGCCTTTTCGGGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACCGTGGCGTCCTTGTCGGTgcgggcgggcccg                                                                                        >  1:1641664‑M2/1‑137 (MQ=255)
                                                           cGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCACGGATATCACAGCCCTGAAGACAAGGGGGGCCTTGTGGGGggggggggggccgcga                                                                                     <  2:2215062‑M2/150‑17 (MQ=255)
                                                            gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggg                                                                                                                 <  1:167751/121‑1 (MQ=255)
                                                            gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggg                                                                                                                 >  2:167751/1‑121 (MQ=255)
                                                             aGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAag                                                                                   <  2:2772240/150‑1 (MQ=255)
                                                                      ggccggggcggTTCGATGCCCGGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCGCGCACACCCAGGGATATCCCACCCCTGAAGACTGTGGGGTCTTTTTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGtt                                                                          <  1:699217/147‑1 (MQ=255)
                                                                          ggggcggTTCGGTGCACTGGAGGTTTTTTAGAGAGTTATTGCCGGTGCCGGGTTTTTCGGGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACTGTGGGGTCGTTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                      <  1:2306569/150‑1 (MQ=255)
                                                                          ggggcggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                      <  2:1347661/150‑1 (MQ=255)
                                                                                gTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaa                                                                                    <  2:2183093‑M2/130‑18 (MQ=255)
                                                                                gTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaa                                                                                    >  1:2183093‑M2/1‑113 (MQ=255)
                                                                                 ttCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtg                                                                                                        >  1:1782908‑M1/1‑65 (MQ=255)
                                                                                 ttCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtg                                                                                                        <  2:1782908‑M1/109‑45 (MQ=255)
                                                                                    gATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCa                                                                                                                                                   >  1:2158245/1‑63 (MQ=255)
                                                                                    gATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCa                                                                                                                                                   <  2:2158245/63‑1 (MQ=255)
                                                                                         ccTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                   >  1:244616/1‑90 (MQ=255)
                                                                                         ccTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg                                                                                                                   <  2:244616/90‑1 (MQ=255)
                                                                                              aGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgc                                                                                                   <  2:2054865‑M1/101‑50 (MQ=255)
                                                                                              aGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgc                                                                                                   >  1:2054865‑M1/1‑52 (MQ=255)
                                                                                                         agaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGt                                                                                                                    <  1:155755/73‑1 (MQ=255)
                                                                                                         agaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGt                                                                                                                    >  2:155755/1‑73 (MQ=255)
                                                                                                              tattGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAAACTCGTGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGt                                  >  1:1870680/1‑150 (MQ=255)
                                                                                                                  gCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtgtg                                                                                                        <  1:1369151/76‑1 (MQ=255)
                                                                                                                  gCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtgtg                                                                                                        >  2:1369151/1‑76 (MQ=255)
                                                                                                                     tgtgCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcaggg                                                                                                                        <  2:877530‑M1/57‑29 (MQ=255)
                                                                                                                     tgtgCCGGCCTTTTCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcaggg                                                                                                                        >  1:877530‑M1/1‑29 (MQ=255)
                                                                                                                             ccTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg                                                                                                       >  2:1084307/1‑66 (MQ=255)
                                                                                                                             ccTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg                                                                                                       <  1:1084307/66‑1 (MQ=255)
                                                                                                                                 ttCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaac                                   <  2:2183093‑M1/130‑114 (MQ=255)
                                                                                                                                 ttCGCGGGCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaac                                   >  1:2183093‑M1/1‑17 (MQ=255)
                                                                                                                                  tCGCGGCCCCCCCCCCccccacaaggccccccttgtcttcagggctgtgatatccgtgggggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcg              <  2:2215062‑M1/150‑135 (MQ=255)
                                                                                                                                    gcgGGCCCGCCCGCCCCCACAGGGATATCACAGCTCTGAAGACAGTGTGGTCCTTGTGGAAGCGGGTGGGCCCGCGAAGAGGCCGGTTCAGACAACAGCGACAATGCACGATAACTGTGCGCCCAGATGCACCTCGTCATCCACCCCCtt            >  2:1344106/1‑150 (MQ=255)
                                                                                                                                     cgGGCCCGCCCGCaccgacaaggacgccacggtcttcagggctgtgatatccctgtgggtgcgggcgggcccccgaaaaggccggcacatgcaataattctctaaagaccctgcagggcatcgaaccggcccgccagcccctgctcggca           >  1:1641664‑M1/1‑13 (MQ=255)
                                                                                                                                     cgGGCCCGCCCGCACCCACAGGGATATCACAGCCTATAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAACCGGGTTCAGACAACATCGACACTGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTg           >  1:2548374/1‑150 (MQ=255)
                                                                                                                                      gggCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaa          >  2:916196‑M1/1‑12 (MQ=255)
                                                                                                                                      gggCCCGCCCGCtcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaa          >  2:2634127‑M1/1‑12 (MQ=255)
                                                                                                                                        gcccgcccGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaac        <  1:787038‑M2/150‑94 (MQ=255)
                                                                                                                                          ccgcccgctcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactg      >  1:606496‑M1/1‑8 (MQ=255)
                                                                                                                                          ccgcccgctcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactg      >  1:2514459‑M1/1‑8 (MQ=255)
                                                                                                                                          ccgcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactg      <  2:815168‑M2/150‑96 (MQ=255)
                                                                                                                                          ccgcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactg      <  2:257394‑M2/150‑96 (MQ=255)
                                                                                                                                          ccgcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCcag      >  1:2442540/1‑150 (MQ=255)
                                                                                                                                           cgcccgctcccacaaggaccccactgtcttcagggctgtgatatccctgtgggtgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgc     <  1:2634127‑M1/150‑144 (MQ=255)
                                                                                                                                              ccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgctcc  <  2:70766‑M2/150‑100 (MQ=255)
                                                                                                                                              ccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAAc                                                     >  2:1724246/1‑99 (MQ=255)
                                                                                                                                              ccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAAc                                                     <  1:1724246/99‑1 (MQ=255)
                                                                                                                                                gcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcct                                                 >  1:2054865‑M2/1‑49 (MQ=255)
                                                                                                                                                gcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcct                                                 <  2:2054865‑M2/101‑53 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGT  >  NC_002947/2078154‑2078445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.