New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2078299	60 (0.520)	14 (0.140)	12/210	NT	21.6%	intergenic (+41/+74)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 2078346	50 (0.510)					intergenic (+88/+27)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein

TGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTC  >  NC_002947/2078197‑2078492                                                                                                                                                      |                                                                                                                                                   tggtggAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGa                                                                                                                                                    <  2:1796296/150‑1 (MQ=255)        gCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcg                                                                                                                                             <  1:2634127‑M2/150‑8 (MQ=255)         cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                                                                                            >  1:2514459‑M2/1‑142 (MQ=255)         cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg                                                                                                                                            >  1:606496‑M2/1‑142 (MQ=255)             ttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggccc                                                                                                                                        >  2:916196‑M2/1‑138 (MQ=255)             ttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggccc                                                                                                                                        >  2:2634127‑M2/1‑138 (MQ=255)              tGCCGAGCAGGGGCTGGCGGGCCGGTTCGATGCCCTGCAGGGTCTTTAGAGAATTATTGCATGTGCCGGCCTTTTCGGGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACCGTGGCGTCCTTGTCGGTgcgggcgggcccg                                                                                                                                       >  1:1641664‑M2/1‑137 (MQ=255)                 cGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCACGGATATCACAGCCCTGAAGACAAGGGGGGCCTTGTGGGGggggggggggccgcga                                                                                                                                    <  2:2215062‑M2/150‑17 (MQ=255)                   aGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAag                                                                                                                                  <  2:2772240/150‑1 (MQ=255)                            ggccggggcggTTCGATGCCCGGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCGCGCACACCCAGGGATATCCCACCCCTGAAGACTGTGGGGTCTTTTTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGtt                                                                                                                         <  1:699217/147‑1 (MQ=255)                                ggggcggTTCGGTGCACTGGAGGTTTTTTAGAGAGTTATTGCCGGTGCCGGGTTTTTCGGGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACTGTGGGGTCGTTGTGGGTGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                                                                     <  1:2306569/150‑1 (MQ=255)                                ggggcggTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                                                                     <  2:1347661/150‑1 (MQ=255)                                      gTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaa                                                                                                                                   <  2:2183093‑M2/130‑18 (MQ=255)                                      gTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaa                                                                                                                                   >  1:2183093‑M2/1‑113 (MQ=255)                                                                    tattGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAAACTCGTGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGt                                                                                 >  1:1870680/1‑150 (MQ=255)                                                                                          gcgGGCCCGCCCGCCCCCACAGGGATATCACAGCTCTGAAGACAGTGTGGTCCTTGTGGAAGCGGGTGGGCCCGCGAAGAGGCCGGTTCAGACAACAGCGACAATGCACGATAACTGTGCGCCCAGATGCACCTCGTCATCCACCCCCtt                                                           >  2:1344106/1‑150 (MQ=255)                                                                                           cgGGCCCGCCCGCACCCACAGGGATATCACAGCCTATAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAACCGGGTTCAGACAACATCGACACTGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTg                                                          >  1:2548374/1‑150 (MQ=255)                                                                                              gcccgcccGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaac                                                       <  1:787038‑M2/150‑94 (MQ=255)                                                                                                ccgcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactg                                                     <  2:257394‑M2/150‑96 (MQ=255)                                                                                                ccgcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactg                                                     <  2:815168‑M2/150‑96 (MQ=255)                                                                                                ccgcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCcag                                                     >  1:2442540/1‑150 (MQ=255)                                                                                                    ccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgctcc                                                 <  2:70766‑M2/150‑100 (MQ=255)                                                                                                    ccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAAc                                                                                                    <  1:1724246/99‑1 (MQ=255)                                                                                                    ccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAAc                                                                                                    >  2:1724246/1‑99 (MQ=255)                                                                                                      gcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcct                                                                                                >  1:2054865‑M2/1‑49 (MQ=255)                                                                                                      gcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcct                                                                                                <  2:2054865‑M2/101‑53 (MQ=255)                                                                                                        aCCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGTACAGTACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgct                                             >  2:2717649/1‑150 (MQ=255)                                                                                                         cccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACaa                                                                                                         >  1:1310013/1‑89 (MQ=255)                                                                                                         cccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACaa                                                                                                         <  2:1310013/89‑1 (MQ=255)                                                                                                          ccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgctgc                                           >  1:3003571/1‑150 (MQ=255)                                                                                                          ccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgctgc                                           >  1:1832728/1‑150 (MQ=255)                                                                                                          ccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgctgc                                           >  1:974081/1‑150 (MQ=255)                                                                                                           cacaGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaa                                                                                   <  2:1782908‑M2/109‑66 (MQ=255)                                                                                                           cacaGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaa                                                                                   >  1:1782908‑M2/1‑44 (MQ=255)                                                                                                            acaGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGccc                                         >  1:2041974/1‑150 (MQ=255)                                                                                                            acaGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGccc                                         >  2:614872/1‑150 (MQ=255)                                                                                                            acaGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGAGAAGAGGCCg                                                                                                                            >  2:99928/1‑67 (MQ=255)                                                                                                            acaGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGAGAAGAGGCCg                                                                                                                            <  1:99928/67‑1 (MQ=255)                                                                                                              aGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCtgt                                                                                           <  2:103621/98‑1 (MQ=255)                                                                                                              aGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCtgt                                                                                           >  1:103621/1‑98 (MQ=255)                                                                                                                ggATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAgc                                     <  2:1832728/150‑1 (MQ=255)                                                                                                                  atatCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgctccaccacaaaatcgat                                   >  1:815168‑M2/1‑37 (MQ=255)                                                                                                                  atatCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgctccaccacaaaatcgat                                   >  1:257394‑M2/1‑37 (MQ=255)                                                                                                                  atatCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                                                                     <  2:1685750/68‑1 (MQ=255)                                                                                                                  atatCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa                                                                                                                     >  1:1685750/1‑68 (MQ=255)                                                                                                                    atCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAAt                                                                                                        <  2:2957611/79‑1 (MQ=255)                                                                                                                    atCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAAt                                                                                                        >  1:2957611/1‑79 (MQ=255)                                                                                                                      cacaGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGAt                               >  2:2736434/1‑150 (MQ=255)                                                                                                                      cacaGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGAt                               <  2:2041974/150‑1 (MQ=255)                                                                                                                        caGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCg                             >  1:2619758/1‑150 (MQ=255)                                                                                                                         aGCCCTGAAGACAGTGGGGTCCTTGTGGGGGCGCGCGGGCCCGCGAAGAGTCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGt                            <  1:2850303/150‑1 (MQ=255)                                                                                                                           cccTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcaca                                                                                                                       >  1:877530‑M2/1‑28 (MQ=255)                                                                                                                           cccTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcaca                                                                                                                       <  2:877530‑M2/57‑30 (MQ=255)                                                                                                                           cccTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTgg                          >  1:1702387/1‑150 (MQ=255)                                                                                                                            tcTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGATGAGTCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTggg                         <  1:1869576/149‑1 (MQ=255)                                                                                                                             cTGAAGACAGTGGGGTCCGTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCCTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTggtg                        <  2:506526/150‑3 (MQ=255)                                                                                                                              tGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATTCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGt                       >  2:643452/1‑150 (MQ=255)                                                                                                                              tGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGt                       >  1:1975116/1‑150 (MQ=255)                                                                                                                               gAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTa                      >  2:212556/1‑150 (MQ=255)                                                                                                                               gAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTa                      >  1:325949/1‑150 (MQ=255)                                                                                                                                    cgatctggtccttgTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgctcggcaaactgctcccgcccaaaatcgatgaacgcccgggtcttgcc                 >  1:2384547‑M2/7‑19 (MQ=255)                                                                                                                                     aGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGcccc                                        <  2:3071884/126‑1 (MQ=255)                                                                                                                                     aGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGcccc                                        >  1:3071884/1‑126 (MQ=255)                                                                                                                                        ggggTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgc                                              >  1:970966/1‑117 (MQ=255)                                                                                                                                        ggggTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgc                                              <  2:970966/117‑1 (MQ=255)                                                                                                                                         gggTCATTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCa            <  1:1344106/150‑1 (MQ=255)                                                                                                                                           gTCCTTGTGGGAgcgggcgggcccgcgaaaaggccggcacaggcaataattctctaaagggcctgcagggcatcgaaccgccccgccagcccctgccgcatggagggcgccaccacaaaatcgatgaacgcccgggtcttgcccagatcg          <  2:2384547‑M2/150‑139 (MQ=255)                                                                                                                                            tCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCa         <  2:1975116/150‑1 (MQ=255)                                                                                                                                             ccTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTgggg                        <  1:1719198/134‑1 (MQ=255)                                                                                                                                             ccTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTgggg                        >  2:1719198/1‑134 (MQ=255)                                                                                                                                              cTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCAc                                                                             <  2:2795724/80‑1 (MQ=255)                                                                                                                                              cTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCAc                                                                             >  1:2795724/1‑80 (MQ=255)                                                                                                                                              cTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGc       >  2:1843211/1‑150 (MQ=255)                                                                                                                                               ttGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTg                           <  2:977963/129‑1 (MQ=255)                                                                                                                                               ttGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTg                           >  1:977963/1‑129 (MQ=255)                                                                                                                                                   gggAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTc  <  2:325949/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   TGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCAGCGGCGATCGTGGGGTAATCACCGTCACCAGCCCGTC  >  NC_002947/2078197‑2078492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.