BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4611727	101 (0.880)	7 (0.060)	5/230	NT	6.6%	intergenic (+643/‑1464)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
*	?	NC_002947	= 4611747	104 (0.960)	7 (0.060)	5/230	NT	6.6%	intergenic (+663/‑1444)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein

Only 100 of 136 total aligned reads displayed.

AGGTGCGCGAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAG  >  NC_002947/4611580‑4611875

   tGCGCGAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCa                                                                                                                                                 <  2:2026136/150‑1 (MQ=32)

     cgcgAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCAACGATCGGCTGCAGTCCCTCGGCCTGATCAGc                                                                                                                                               <  1:2019749/150‑1 (MQ=17)

        gAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCAt                                                                                                                                            <  1:2226338/150‑1 (MQ=32)

              tGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGcc                                                                                                                                      <  2:1070054/150‑1 (MQ=32)

                cGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCAt                                                                                                                                    <  1:1536038/150‑1 (MQ=32)

                   tCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCATCGGCCTGATCAGCCAt                                                                                                                                            >  1:1672208/1‑139 (MQ=18)

                   tCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCATCGGCCTGATCAGCCAt                                                                                                                                            <  2:1672208/139‑1 (MQ=18)

                    cAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAag                                                                                                                                >  1:1197155‑M2/1‑148 (MQ=255)

                    cAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAag                                                                                                                                >  2:318977‑M2/1‑148 (MQ=255)

                     aGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTTGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatggcgccatggctgatcagg                                                                                                                               <  1:2505906‑M1/150‑24 (MQ=255)

                     aGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAagg                                                                                                                               <  1:2822614‑M2/150‑4 (MQ=255)

                             gagaCGGACTTGGCGTTCATCGCCCGCCTTGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatggcgccatggctgatcaggccgaggga                                                                                                                       <  2:2869274‑M1/150‑32 (MQ=255)

                                aCGGACTTGACGTGCATCGCCCGCGTGGCCGCTTAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGaa                                                                                                                    >  2:118215/1‑150 (MQ=255)

                                        ggCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAggg                                                                                                            >  2:1113162/1‑150 (MQ=35)

                                         gCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCcgac                                                                                                                          >  2:353074/1‑135 (MQ=33)

                                         gCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCcgac                                                                                                                          <  1:353074/135‑1 (MQ=33)

                                            ttCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGAGCAGCCATGGCGCCATCAAGGCCGACGATGAAAGCGAggtcgtc                                                                                                        >  2:462074/1‑145 (MQ=255)

                                              cATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTg                                                                                                      >  2:2356255/1‑150 (MQ=40)

                                               aTCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGc                                                                                                     >  1:1259805/1‑150 (MQ=40)

                                                 cgcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGa                                                                                                   >  1:734283/1‑150 (MQ=255)

                                                  gcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGAt                                                                                                  <  1:2946476/150‑1 (MQ=40)

                                                  gcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGAt                                                                                                  <  1:1028808/150‑1 (MQ=40)

                                                   cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa                                                                                                                                 >  1:1236939‑M2/1‑117 (MQ=255)

                                                       ccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATgacga                                                                                             <  2:1188389/150‑1 (MQ=255)

                                                            ccGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGc                                                                                        <  1:319300/150‑1 (MQ=39)

                                                             cGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCCTCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGcc                                                                                       >  1:2689672/1‑150 (MQ=38)

                                                               cTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGa                                                                                                               >  1:2306334/1‑124 (MQ=33)

                                                                  aagaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAg                                                                                  <  1:2436465/150‑1 (MQ=255)

                                                                    gaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGAt                                                                                                  <  2:1047717/132‑1 (MQ=40)

                                                                    gaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGAt                                                                                                  >  1:1047717/1‑132 (MQ=40)

                                                                    gaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGc                                                                                >  1:1297098/1‑150 (MQ=40)

                                                                      agGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGccc                                                                              >  1:665396/1‑150 (MQ=255)

                                                                        gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTg                                                                            <  1:3039229/150‑1 (MQ=40)

                                                                        gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTg                                                                            >  1:1935580/1‑150 (MQ=255)

                                                                         cTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAggg                                                                                                            >  1:1706524/1‑117 (MQ=33)

                                                                         cTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga                                                                           <  1:2356255/150‑1 (MQ=255)

                                                                         cTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga                                                                           <  2:2822614/150‑1 (MQ=255)

                                                                          ttCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCCGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGGTGACGACGGGCCGGTAGGCCCTgag                                                                          >  1:2273594/1‑150 (MQ=255)

                                                                                tACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga                                                                           <  2:2319137/143‑1 (MQ=255)

                                                                                   cGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGcgg                                                                 >  1:179450/1‑148 (MQ=255)

                                                                                   cGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTg                                                                 >  2:2239208/1‑150 (MQ=255)

                                                                                    gCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGt                                                                >  1:1407551/1‑150 (MQ=255)

                                                                                     cTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAgg                                                                                                             >  2:1362643/1‑104 (MQ=33)

                                                                                     cTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAgg                                                                                                             <  1:1362643/104‑1 (MQ=33)

                                                                                         gcgcACAGTGAAAAGCTGTACAAGAAGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCaa                                                           <  2:665396/150‑1 (MQ=255)

                                                                                           gcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatggcgccatggctgatcaggccgagg                                                                                                                         >  1:606771‑M1/1‑57 (MQ=255)

                                                                                           gcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTtgatggcgccatggctgatcaggccgagg                                                                                                                         <  2:606771‑M1/86‑30 (MQ=255)

                                                                                           gcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTa                                                                                   <  1:1954617/124‑1 (MQ=255)

                                                                                           gcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGc                                                         >  1:2351001/1‑150 (MQ=255)

                                                                                            cacaGTGAAAAGCTGCACAAGCTGATAATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGcc                                                        >  1:897635/1‑150 (MQ=255)

                                                                                                gTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACa                                                    <  2:2690023/150‑1 (MQ=255)

                                                                                                gTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACa                                                    >  2:1774569/1‑150 (MQ=255)

                                                                                                 tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAag                                                                                                                                >  2:762979‑M2/1‑71 (MQ=255)

                                                                                                 tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAag                                                                                                                                <  1:762979‑M2/73‑3 (MQ=255)

                                                                                                 tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAg                                                   >  1:1650304/1‑150 (MQ=255)

                                                                                                 tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAg                                                   >  2:390755/1‑150 (MQ=255)

                                                                                                 tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATCGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAg                                                   >  1:616664/1‑150 (MQ=255)

                                                                                                    aaaGCTGCACAAGCTGATAATCACCGATCGGCTGCAGTCCCTCTGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGAc                                                                                                                 >  1:1606625/1‑85 (MQ=255)

                                                                                                    aaaGCTGCACAAGCTGATAATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGAc                                                                                                                 <  2:1606625/85‑1 (MQ=25)

                                                                                                     aaGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGt                                               <  2:1935580/150‑1 (MQ=255)

                                                                                                        cTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGc                                            >  2:2181459/1‑150 (MQ=255)

                                                                                                           cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGAt                                         <  2:375468/150‑1 (MQ=255)

                                                                                                           cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGAt                                         >  2:2352608/1‑150 (MQ=255)

                                                                                                            acaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATc                                        >  2:261902/1‑150 (MQ=255)

                                                                                                              aaGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGGGCCATCAAGGCCGACGATGAAGACGCGGGGCGAGACGGTGACGACGAGCCGGTAGGCCCTGAGAGCGTGACGTACCAACAAAACACCGGTGGGGATCaa                                      >  1:1725109/1‑150 (MQ=11)

                                                                                                              aaGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGt                                                                     <  1:278829/119‑1 (MQ=255)

                                                                                                                  tGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGATGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCa                                  >  2:1718150/1‑150 (MQ=255)

                                                                                                                   gATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAg                                     <  2:1196696/146‑1 (MQ=255)

                                                                                                                   gATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAg                                     >  1:1196696/1‑146 (MQ=255)

                                                                                                                    atcatcACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATAAAGCCAtt                                >  2:17753/1‑149 (MQ=255)

                                                                                                                      catcaCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCt                                                                  <  2:2147785/114‑1 (MQ=255)

                                                                                                                      catcaCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCt                                                                  >  1:2147785/1‑114 (MQ=255)

                                                                                                                          aCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc                          <  1:1399025/150‑1 (MQ=255)

                                                                                                                          aCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc                          <  1:1113162/150‑1 (MQ=255)

                                                                                                                          aCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc                          <  1:390755/150‑1 (MQ=255)

                                                                                                                          aCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc                          >  1:2781642/1‑150 (MQ=255)

                                                                                                                           ccGATCGGCTGCAGTCCCTCGGCCTGAGCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGcc                         <  1:1774569/150‑1 (MQ=255)

                                                                                                                                  gCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTg                                                                                                      >  1:210431/1‑66 (MQ=255)

                                                                                                                                   cTGCAGTCCCTCGGCCTGATCAGCAATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgccgc                 <  2:1259805/150‑1 (MQ=255)

                                                                                                                                     gCAGTCCCTCGGCCTGATCAGCCATGGTGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCTCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCtt               <  2:1389719/150‑1 (MQ=255)

                                                                                                                                        gTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCt                                                                             >  2:1970672/1‑85 (MQ=255)

                                                                                                                                         tCCCTCGGCCTGATCAGTCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGCGCTTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCATgcgc           <  2:1191170/150‑1 (MQ=255)

                                                                                                                                         tCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTgcgc           >  1:2616969/1‑150 (MQ=255)

                                                                                                                                           ccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgc                                                                         <  2:606771‑M2/86‑58 (MQ=255)

                                                                                                                                            cTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcacc        <  2:1839532‑M2/150‑123 (MQ=255)

                                                                                                                                            cTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTac        >  1:2669035/1‑150 (MQ=255)

                                                                                                                                            cTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTac        >  2:2101937/1‑150 (MQ=255)

                                                                                                                                             tCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGc                                    <  2:2693269/121‑1 (MQ=255)

                                                                                                                                             tCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGc                                    >  1:2693269/1‑121 (MQ=255)

                                                                                                                                               ggCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggc     <  1:1581858‑M2/150‑126 (MQ=255)

                                                                                                                                                gCCTtgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagctttcaactatgcgcaaagcggtatacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggcc    <  1:375468‑M1/150‑147 (MQ=255)

                                                                                                                                                gCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTgg                                             <  2:1591845/109‑1 (MQ=255)

                                                                                                                                                gCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTgg                                             >  1:1591845/1‑109 (MQ=255)

                                                                                                                                                 ccTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggcaaggcgggcgatgaacgccaagtccgtctcaccggcct   <  1:2505906‑M2/150‑128 (MQ=255)

                                                                                                                                                  cTtgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggcctg  >  2:318977‑M1/1‑2 (MQ=255)

                                                                                                                                                  cTtgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggcctg  >  1:1197155‑M1/1‑2 (MQ=255)

                                                                                                                                                  cTtgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttca                                                                               <  1:762979‑M1/73‑72 (MQ=255)

                                                                                                                                                  cTtgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttca                                                                               >  2:762979‑M1/1‑2 (MQ=255)

                                                                                                                                                  cTGATCAGCCATGGCGCCATCAAGGCTGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAg  <  1:1544163/150‑1 (MQ=255)

                                                                                                                                                   ttgatggcgccatggctgatcaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcggg                                 <  2:1236939‑M1/118‑118 (MQ=255)

AGGTGCGCGAATTCTGCGTTCAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAG  >  NC_002947/4611580‑4611875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.