BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4611727	101 (0.880)	7 (0.060)	5/230	NT	6.6%	intergenic (+643/‑1464)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
*	?	NC_002947	= 4611747	104 (0.960)	7 (0.060)	5/230	NT	6.6%	intergenic (+663/‑1444)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein

Only 100 of 124 total aligned reads displayed.

CAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCACCGCTCGTCAG  >  NC_002947/4611600‑4611896

cAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAag                                                                                                                                                     >  2:318977‑M2/1‑148 (MQ=255)

 aGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAagg                                                                                                                                                    <  1:2822614‑M2/150‑4 (MQ=255)

  ggCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTATACCGCTTTGCGCATAGTTGAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAaggc                                                                                                                                                   <  1:375468‑M2/150‑5 (MQ=255)

            aCGGACTTGACGTGCATCGCCCGCGTGGCCGCTTAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGaa                                                                                                                                         >  2:118215/1‑150 (MQ=255)

                    ggCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAggg                                                                                                                                 >  2:1113162/1‑150 (MQ=35)

                     gCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCcgac                                                                                                                                               <  1:353074/135‑1 (MQ=33)

                     gCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCTACGATGAAGACGAGGGc                                                                                                                                >  1:935679/1‑150 (MQ=25)

                       gTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCtt                                                                                                                              >  1:2690023/1‑150 (MQ=38)

                       gTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCtt                                                                                                                              >  2:2436465/1‑150 (MQ=38)

                        ttCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGAGCAGCCATGGCGCCATCAAGGCCGACGATGAAAGCGAggtcgtc                                                                                                                             >  2:462074/1‑145 (MQ=255)

                          cATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTg                                                                                                                           >  2:2356255/1‑150 (MQ=40)

                           aTCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGc                                                                                                                          >  1:1259805/1‑150 (MQ=40)

                             cgcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGa                                                                                                                        >  1:734283/1‑150 (MQ=255)

                              gcccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGAt                                                                                                                       <  1:1028808/150‑1 (MQ=40)

                               cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa                                                                                                                                                      >  1:1236939‑M2/1‑117 (MQ=255)

                               cccgccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAa                                                                                                                                                      <  2:1236939‑M2/118‑2 (MQ=255)

                                   ccTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATgacga                                                                                                                  <  2:1188389/150‑1 (MQ=255)

                                        ccGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGc                                                                                                             <  1:319300/150‑1 (MQ=39)

                                         cGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCCTCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGcc                                                                                                            >  1:2689672/1‑150 (MQ=38)

                                         cGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGcc                                                                                                            <  2:515161/150‑1 (MQ=38)

                                           cTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGa                                                                                                                                    <  2:2306334/124‑1 (MQ=33)

                                           cTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGa                                                                                                                                    >  1:2306334/1‑124 (MQ=33)

                                            tGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGt                                                                                                         <  2:1196588/150‑1 (MQ=40)

                                              aagaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAg                                                                                                       <  1:2436465/150‑1 (MQ=255)

                                                gaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGAt                                                                                                                       >  1:1047717/1‑132 (MQ=40)

                                                gaagGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGc                                                                                                     >  1:1297098/1‑150 (MQ=40)

                                                  agGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGccc                                                                                                   >  1:665396/1‑150 (MQ=255)

                                                    gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTg                                                                                                 >  1:1935580/1‑150 (MQ=255)

                                                    gCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTg                                                                                                 <  1:3039229/150‑1 (MQ=40)

                                                     cTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAggg                                                                                                                                 >  1:1706524/1‑117 (MQ=33)

                                                     cTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAggg                                                                                                                                 <  2:1706524/117‑1 (MQ=33)

                                                     cTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga                                                                                                <  2:2822614/150‑1 (MQ=255)

                                                     cTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTga                                                                                                <  1:2356255/150‑1 (MQ=255)

                                                      ttCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCCGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGGTGACGACGGGCCGGTAGGCCCTgag                                                                                               >  1:2273594/1‑150 (MQ=255)

                                                               cGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTg                                                                                      >  2:2239208/1‑150 (MQ=255)

                                                                gCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGt                                                                                     >  1:1407551/1‑150 (MQ=255)

                                                                 cTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAgg                                                                                                                                  >  2:1362643/1‑104 (MQ=33)

                                                                     gcgcACAGTGAAAAGCTGTACAAGAAGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCaa                                                                                <  2:665396/150‑1 (MQ=255)

                                                                       gcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTa                                                                                                        >  2:1954617/1‑124 (MQ=255)

                                                                       gcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTa                                                                                                        <  1:1954617/124‑1 (MQ=255)

                                                                       gcACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGc                                                                              >  1:2351001/1‑150 (MQ=255)

                                                                        cacaGTGAAAAGCTGCACAAGCTGATAATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGcc                                                                             >  1:897635/1‑150 (MQ=255)

                                                                            gTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACa                                                                         >  2:1774569/1‑150 (MQ=255)

                                                                            gTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACa                                                                         <  2:2690023/150‑1 (MQ=255)

                                                                             ttcgtaGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGATAGGCCCAGAGAGCATGGTGGACCAAGCCAACAg                                                                        >  1:1643144/6‑150 (MQ=17)

                                                                             tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAag                                                                                                                                                     <  1:762979‑M2/73‑3 (MQ=255)

                                                                             tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAag                                                                                                                                                     >  2:762979‑M2/1‑71 (MQ=255)

                                                                             tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAg                                                                        >  2:390755/1‑150 (MQ=255)

                                                                             tGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATCGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAg                                                                        >  1:616664/1‑150 (MQ=255)

                                                                               aaaaGCTGCACAAGCTGATCATCACCGATCGGCGGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCg                                                                      <  1:15251/150‑1 (MQ=255)

                                                                                aaaGCTGCACAAGCTGATAATCACCGATCGGCTGCAGTCCCTCTGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGAc                                                                                                                                      >  1:1606625/1‑85 (MQ=255)

                                                                                aaaGCTGCACAAGCTGATAATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGAc                                                                                                                                      <  2:1606625/85‑1 (MQ=25)

                                                                                 aaGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGt                                                                    <  2:1935580/150‑1 (MQ=255)

                                                                                    cTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGc                                                                 >  2:2181459/1‑150 (MQ=255)

                                                                                       cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGAt                                                              <  2:375468/150‑1 (MQ=255)

                                                                                       cacaAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGAt                                                              >  2:2352608/1‑150 (MQ=255)

                                                                                          aaGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGGGCCATCAAGGCCGACGATGAAGACGCGGGGCGAGACGGTGACGACGAGCCGGTAGGCCCTGAGAGCGTGACGTACCAACAAAACACCGGTGGGGATCaa                                                           >  1:1725109/1‑150 (MQ=11)

                                                                                          aaGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGt                                                                                          <  1:278829/119‑1 (MQ=255)

                                                                                             cTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGcc                                                        <  1:118215/150‑1 (MQ=255)

                                                                                              tGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGATGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCa                                                       >  2:1718150/1‑150 (MQ=255)

                                                                                               gATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAg                                                          >  1:1196696/1‑146 (MQ=255)

                                                                                               gATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAg                                                          <  2:1196696/146‑1 (MQ=255)

                                                                                                  catcaCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCt                                                                                       >  1:2147785/1‑114 (MQ=255)

                                                                                                  catcaCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCt                                                                                       <  2:2147785/114‑1 (MQ=255)

                                                                                                   atcaCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATAccc                                                  <  1:2181459/150‑1 (MQ=255)

                                                                                                      aCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc                                               <  1:1399025/150‑1 (MQ=255)

                                                                                                      aCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc                                               <  1:1113162/150‑1 (MQ=255)

                                                                                                      aCCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGc                                               >  1:2781642/1‑150 (MQ=255)

                                                                                                       ccGATCGGCTGCAGTCCCTCGGCCTGAGCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGcc                                              <  1:1774569/150‑1 (MQ=255)

                                                                                                              gCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTg                                                                                                                           <  2:210431/66‑1 (MQ=255)

                                                                                                              gCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTg                                                                                                                           >  1:210431/1‑66 (MQ=255)

                                                                                                              gCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgccg                                       >  2:1177051/1‑150 (MQ=255)

                                                                                                               cTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGATGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgccgc                                      <  1:1718150/150‑1 (MQ=255)

                                                                                                               cTGCAGTCCCTCGGCCTGATCAGCAATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTcgccgc                                      <  2:1259805/150‑1 (MQ=255)

                                                                                                                 gCAGTCCCTCGGCCTGATCAGCCATGGTGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCTCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCtt                                    <  2:1389719/150‑1 (MQ=255)

                                                                                                                    gTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCt                                                                                                  >  2:1970672/1‑85 (MQ=255)

                                                                                                                     tCCCTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggcaaggcgggcgatgaacgccaagtccgtctc                                <  2:2869274‑M2/150‑120 (MQ=255)

                                                                                                                      cccTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCt                               <  2:734283/150‑1 (MQ=255)

                                                                                                                       ccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgc                                                                                              <  2:606771‑M2/86‑58 (MQ=255)

                                                                                                                       ccTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgc                                                                                              >  1:606771‑M2/1‑29 (MQ=255)

                                                                                                                        cTCGGCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcacc                             <  2:1839532‑M2/150‑123 (MQ=255)

                                                                                                                        cTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTac                             >  2:1544163/1‑150 (MQ=255)

                                                                                                                        cTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTac                             >  1:2669035/1‑150 (MQ=255)

                                                                                                                         tCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGc                                                         <  2:2693269/121‑1 (MQ=255)

                                                                                                                         tCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTaca                            >  1:1323540/1‑150 (MQ=255)

                                                                                                                           ggCCTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggc                          <  1:1581858‑M2/150‑126 (MQ=255)

                                                                                                                            gCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTgg                                                                  >  1:1591845/1‑109 (MQ=255)

                                                                                                                             ccTGATCAGCCATGGCGCCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggcaaggcgggcgatgaacgccaagtccgtctcaccggcct                        <  1:2505906‑M2/150‑128 (MQ=255)

                                                                                                                                 aTCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAg                    >  1:2918588/1‑150 (MQ=255)

                                                                                                                                 aTCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGAGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAg                    >  1:839488/1‑150 (MQ=255)

                                                                                                                                  tCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAgg                   >  2:289476/1‑150 (MQ=255)

                                                                                                                                   cAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGt                  <  2:1323540/150‑1 (MQ=255)

                                                                                                                                      ccATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCAGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTgcg               >  1:18978/1‑150 (MQ=255)

                                                                                                                                        aTGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGc                                                                                            <  2:2648575/71‑1 (MQ=255)

                                                                                                                                        aTGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGc                                                                                            >  1:2648575/1‑71 (MQ=255)

                                                                                                                                          ggCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCCAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCAcc           >  1:832006/1‑150 (MQ=255)

                                                                                                                                            cgcCATCAaggccgagggactgcagccgatcggtgatgatcagcttgtgcagcttttcactgtgcgcaaagcggtagacgaagccttcttcagcggccaggcgggcgatgaacgccaagtccgtctcaccggcctgaacgcagaattcgc         >  1:1839532‑M2/1‑8 (MQ=255)

                                                                                                                                             gcCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCACCGCt        >  1:1500993/1‑150 (MQ=255)

                                                                                                                                                   aaGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCACCGCTCGTCAg  <  2:2616969/150‑1 (MQ=255)

                                                                                                                                                   aaGGCCGACGAGGAAGACGAGGGGTCCTCCGATGACTACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCACCGCTCGTCAg  <  2:2689672/150‑1 (MQ=17)

CAGGCCGGTGAGACGGACTTGGCGTTCATCGCCCGCCTGGCCGCTGAAGAAGGCTTCGTCTACCGCTTTGCGCACAGTGAAAAGCTGCACAAGCTGATCATCACCGATCGGCTGCAGTCCCTCGGCCTGATCAGCCATGGCGCCATCAAGGCCGACGATGAAGACGAGGGCTTCTGCGATGACGACGAGCCGGTAGGCCCTGAGAGCGTGCTGTACCAAGCCAACAGCGGTGGCGATCAAGCCATACCCTGCCTTCGCCGCTTGCGCTACACCGAGCAGGTGCGCACCGCTCGTCAG  >  NC_002947/4611600‑4611896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.