New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5827863 =108 (0.940)7 (0.060) 7/232 NT 5.5% intergenic (+9/+190) mtgA/rpoH monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
?NC_002947 5827987 = 140 (1.290)intergenic (+133/+66) mtgA/rpoH monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32

Only 100 of 160 total aligned reads displayed.

GTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAC  >  NC_002947/5827714‑5828012
                                                                                                                                                     |                                                                                                                                                     
gTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAggcc                                                                                                                                                       >  2:1903608/1‑150 (MQ=255)
    tgcCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAggcccggc                                                                                                                                                   >  1:1874160/1‑150 (MQ=255)
     tacagcgtatcggctgagcgtattcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctatggggtgagcggcttttttgtttggctttgCCGGcc                                                                                                                                                  <  2:2541513‑M1/6‑1 (MQ=255)
            ccAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGC                                                                                                                                           <  1:2182825‑M1/150‑1 (MQ=255)
               aTCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGG                                                                                                                                        <  2:1958805‑M1/150‑1 (MQ=255)
                tCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAggcccggc                                                                                                                                                   >  1:2894909/1‑138 (MQ=255)
                tCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGT                                                                                                                                       >  1:1369320‑M1/1‑150 (MQ=255)
                         gTGCCAGCCGCCCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCt                                                                                                                              <  1:2706796/150‑1 (MQ=255)
                          attcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctagggggtgagcggcttttttgtttggctttgCCGGCCCTTTCGCGGGTAAACCCGCTc                                                                                                                             <  2:2872454‑M1/27‑1 (MQ=255)
                              aGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTAc                                                                                                                         <  1:1903608/150‑1 (MQ=255)
                               gCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACg                                                                                                                        >  1:1505640/1‑150 (MQ=255)
                                gatctcgaGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACgg                                                                                                                       <  2:2373469/145‑1 (MQ=255)
                                  gaccgaGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGc                                                                                                                     >  1:109484/1‑150 (MQ=255)
                                      gaGTGCCTACGTGGCCAGCCAGGCTAGCTGTATTCGCGGGCAGTGGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACgggagatc                                                                                                                 >  1:2373469/1‑145 (MQ=38)
                                           ccTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGTTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGG                                                                                                                                         >  1:563206‑M1/1‑121 (MQ=255)
                                           ccTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGTTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGG                                                                                                                                         <  2:563206‑M1/121‑1 (MQ=255)
                                            cTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATcc                                                                                                           >  2:2046069/1‑150 (MQ=255)
                                            cTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATcc                                                                                                           >  1:2086873/1‑150 (MQ=255)
                                            cTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCGCCTACGGGCAACCGCATcc                                                                                                           >  1:1811035/1‑150 (MQ=255)
                                               cGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCg                                                                                                        <  1:1772678/150‑1 (MQ=255)
                                               cGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCg                                                                                                        <  1:164367/150‑1 (MQ=255)
                                                    ccAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCCTTCGCGGGTAAgcccgctcctaccggggatgcggttgcctggcgg                                                                                                   >  1:2723783‑M1/1‑116 (MQ=255)
                                                        ccggcccggcTGGCTTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTTGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATcc                                                                                                           <  1:944114/138‑1 (MQ=255)
                                                          gggccggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgcg                                                                                             <  1:2046069/150‑1 (MQ=255)
                                                           ggccggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                            <  1:1216473/150‑1 (MQ=255)
                                                               ggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAggcccggccc                                                                                                                                                 >  2:3013298/1‑93 (MQ=255)
                                                               ggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAggcccggccc                                                                                                                                                 <  1:3013298/93‑1 (MQ=255)
                                                                 gtGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAc                                                                                      <  1:276841/149‑1 (MQ=255)
                                                                 cTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAc                                                                                      >  2:628929/1‑150 (MQ=255)
                                                                  tGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTTAGCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAcc                                                                                     >  1:2202491/1‑150 (MQ=255)
                                                                  tGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAcc                                                                                     >  1:1317100/1‑150 (MQ=255)
                                                                       tCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCgcgc                                                                                <  1:2529970/150‑1 (MQ=255)
                                                                            ggCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACa                                                                           >  2:1070067/1‑150 (MQ=255)
                                                                                  tGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAAc                                                                     <  2:342330/150‑1 (MQ=255)
                                                                                   gAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAAcc                                                                    >  2:533211/1‑150 (MQ=255)
                                                                                    aGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCACCCg                                                                   >  2:548332/1‑150 (MQ=255)
                                                                                      gtaGCTGGGCCCGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGc                                                                                                                               <  2:1450012/86‑1 (MQ=38)
                                                                                      ccAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCggg                                                                                           >  2:1197981/1‑124 (MQ=255)
                                                                                      ccAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCa                                                                 >  1:749408/1‑150 (MQ=255)
                                                                                       cAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgc                                                                                              >  2:1310367/1‑120 (MQ=255)
                                                                                           tGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCCTTCGCGGGTAAgcccgctcctacaggggatgcggtt                                                                                                            >  1:2761339‑M1/1‑77 (MQ=255)
                                                                                           tGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCCTTCGCGGGTAAgcccgctcctacaggggatgcggtt                                                                                                            <  2:2761339‑M1/102‑26 (MQ=255)
                                                                                               cgggcCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTa                                                        <  1:675162/150‑1 (MQ=255)
                                                                                                gggcCCACCTACCTGATGCAGCTGGACTCCTCCAGAAACCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAg                                                       <  1:2335027/150‑1 (MQ=255)
                                                                                                    ccAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAg                                                       <  2:1528993/146‑1 (MQ=255)
                                                                                                    ccAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAg                                                       >  1:1528993/1‑146 (MQ=255)
                                                                                                      aGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTa                                                                             >  2:1756564/1‑122 (MQ=255)
                                                                                                      aGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAANGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCCGCCTCCTCGCCGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCgg                                                 >  1:2478023/1‑150 (MQ=255)
                                                                                                        cTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCaa                                                                      >  1:293597/1‑127 (MQ=255)
                                                                                                        cTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCaa                                                                      <  2:293597/127‑1 (MQ=255)
                                                                                                        cTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGc                                               <  2:1369320/150‑1 (MQ=255)
                                                                                                            cgctggccctatggggtgagcggcttttttgtttggctttgCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTAc                                           >  2:2664133‑M1/42‑150 (MQ=255)
                                                                                                            cTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCgg                                                                                                       >  2:1636187/1‑90 (MQ=255)
                                                                                                            cTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCgg                                                                                                       <  1:1636187/90‑1 (MQ=255)
                                                                                                            cTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCttac                                           <  1:841426‑M2/150‑5 (MQ=255)
                                                                                                              gATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACgg                                                                                                                       <  2:2259944/72‑1 (MQ=255)
                                                                                                              gATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATcccc                                                            >  1:666409/1‑131 (MQ=255)
                                                                                                               aTGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                            <  1:2658613/98‑1 (MQ=255)
                                                                                                               aTGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                            >  2:2658613/1‑98 (MQ=255)
                                                                                                                tGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGTGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCttacccgc                                       >  2:2199209‑M2/1‑142 (MQ=255)
                                                                                                                 gCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgtaggagcggg                                                <  2:141613‑M1/140‑86 (MQ=255)
                                                                                                                 gCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgtaggagcggg                                                >  1:141613‑M1/1‑55 (MQ=255)
                                                                                                                   aGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcg                                                                                   >  1:616820/1‑103 (MQ=255)
                                                                                                                    gCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCTCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAag                                   >  2:2923913/1‑150 (MQ=255)
                                                                                                                     cTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCgg                                                 >  1:1019208/1‑135 (MQ=255)
                                                                                                                      tGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAagag                                 >  2:2002220/1‑150 (MQ=255)
                                                                                                                      tGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAagag                                 >  1:2814128/1‑150 (MQ=255)
                                                                                                                        gACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCttacccgcgaa                                    <  2:743597‑M2/145‑12 (MQ=255)
                                                                                                                         aCTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgc                                                                                              <  2:1256943/86‑1 (MQ=255)
                                                                                                                         aCTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgc                                                                                              >  1:1256943/1‑86 (MQ=255)
                                                                                                                          ctcctcCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCg                             <  2:912938/150‑1 (MQ=255)
                                                                                                                            tgagcggcttttttgtttggctttgCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCTCGAAGAGGCCg                             >  2:1808009‑M1/26‑148 (MQ=255)
                                                                                                                            tgagcggcttttttgtttggctttgCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCTCGAAGAGGCCg                             <  1:1808009‑M1/123‑1 (MQ=255)
                                                                                                                              tccAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGc                                                   <  2:658300/124‑1 (MQ=255)
                                                                                                                              tccAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCaa                         >  2:1128161/1‑150 (MQ=255)
                                                                                                                                cAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcgc                                                                                  <  2:426432/91‑1 (MQ=255)
                                                                                                                                cAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcgc                                                                                  >  1:426432/1‑91 (MQ=255)
                                                                                                                                cAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAg                       >  2:2067467/1‑150 (MQ=255)
                                                                                                                                cAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAg                       >  1:1005782/1‑150 (MQ=255)
                                                                                                                                 aGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGc                      <  1:1070067/150‑1 (MQ=255)
                                                                                                                                    aaGCTTTGAATGCAGGCCCGGCCGTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCAGCGGGCGTGGCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaa                   <  1:533211/150‑1 (MQ=38)
                                                                                                                                    aaGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcgc                                                                                  >  1:1165448/1‑87 (MQ=255)
                                                                                                                                    aaGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaa                   <  1:451772/150‑1 (MQ=255)
                                                                                                                                     aGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaa                  <  2:1005782/150‑1 (MQ=255)
                                                                                                                                        tttGAATGCCGGCCCGGCCCTTTCCCGGGTAAACCCGCTCCTACTGGCAACCGCATCCCCGGCCTCCTCGCGGGCCACCCCGCGCCTACACGCAACCCACTCCCCTGTAAGAGCGGACTTACGCCCGAAGAGGCAGGCAAAGCcacgcat               >  2:594802/1‑145 (MQ=255)
                                                                                                                                        tttGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAGCCCGCGCATACCGGCAACCGGGTGGCACGCTTCAATTGGCGTACCCGCGAAGAGGCCGGCAAAGCcaaacaa               >  1:2983546/1‑150 (MQ=21)
                                                                                                                                        tttGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaacaa               >  2:1234281/1‑150 (MQ=255)
                                                                                                                                          tGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACaaaa             <  1:797397/150‑1 (MQ=255)
                                                                                                                                              tGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGc         >  2:275753/1‑150 (MQ=255)
                                                                                                                                               gCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGcc        <  2:1813815/150‑1 (MQ=255)
                                                                                                                                               gCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGACAACCGCATCCTCTGTAGGAGCGGGCTTACCCGCGAAGAGGACGGCAAAGCCAAACAAAAAAGcc        <  2:260038/150‑1 (MQ=255)
                                                                                                                                                 aGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGa                                                     >  2:51628/1‑103 (MQ=255)
                                                                                                                                                 aGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGa                                                     <  1:51628/103‑1 (MQ=255)
                                                                                                                                                 aGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGc      >  2:703630/1‑150 (MQ=255)
                                                                                                                                                 aGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGc      >  1:1939531/1‑150 (MQ=255)
                                                                                                                                                 aGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGc      >  2:270177/1‑150 (MQ=255)
                                                                                                                                                 aGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCAGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAACCCAAACAAACAAGCCGc      >  1:2196256/1‑150 (MQ=255)
                                                                                                                                                  ggcccggcccTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCgg                                                 <  2:1058758/106‑1 (MQ=255)
                                                                                                                                                     CCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGACGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAc  <  2:2335016‑M1/150‑1 (MQ=255)
                                                                                                                                                     CCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAc  >  2:1388798‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTGCTGCCAAGCCCAATCAAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAC  >  NC_002947/5827714‑5828012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.