New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5827881127 (1.110)9 (0.090) 8/222 NT 6.9% intergenic (+27/+172) mtgA/rpoH monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
?NC_002947 = 5827967 128 (1.230)intergenic (+113/+86) mtgA/rpoH monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32

Only 100 of 178 total aligned reads displayed.

AAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCT  >  NC_002947/5827732‑5828030
                                                                                                                                                     |                                                                                                                                                     
   tGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAAcc                                                                                                                                                    <  2:1621555/150‑1 (MQ=255)
       gTGCCAGCCGCCCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCt                                                                                                                                                <  1:2706796/150‑1 (MQ=255)
        attcgccagttggagaagaatgcgatgaacaaggtcaaggcactgatcgctgcctgattgagtctgggttgtaaagaaaagccgctggccctagggggtgagcggcttttttgtttggctttgCCGGCCCTTTCGCGGGTAAACCCGCTc                                                                                                                                               <  2:2872454‑M1/27‑1 (MQ=255)
              gatctcgaGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACgg                                                                                                                                         <  2:2373469/145‑1 (MQ=255)
                gaccgaGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGc                                                                                                                                       >  1:109484/1‑150 (MQ=255)
                    gaGTGCCTACGTGGCCAGCCAGGCTAGCTGTATTCGCGGGCAGTGGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACgggagatc                                                                                                                                   >  1:2373469/1‑145 (MQ=38)
                          cTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATcc                                                                                                                             >  2:2046069/1‑150 (MQ=255)
                          cTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATcc                                                                                                                             >  1:2086873/1‑150 (MQ=255)
                          cTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCGCCTACGGGCAACCGCATcc                                                                                                                             >  1:1811035/1‑150 (MQ=255)
                           tACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACg                                                                                                                                          <  2:2391842/136‑1 (MQ=255)
                                atccAGCCGGCCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGcc                                                                                                                       >  1:260038/3‑150 (MQ=255)
                                 tccAGCCGGCCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGcct                                                                                                                      >  2:1381768/2‑150 (MQ=255)
                                  ccAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtagg                                                                                                                     >  2:1924177‑M1/1‑116 (MQ=255)
                                      ccggcccggcTGGCTTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTTGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATcc                                                                                                                             >  2:944114/1‑138 (MQ=255)
                                      ccggcccggcTGGCTTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTTGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATcc                                                                                                                             <  1:944114/138‑1 (MQ=255)
                                        gggccggCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgcg                                                                                                               <  1:2046069/150‑1 (MQ=255)
                                               cTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAc                                                                                                        >  2:628929/1‑150 (MQ=255)
                                                tGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTTAGCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAcc                                                                                                       >  1:2202491/1‑150 (MQ=255)
                                                 ggATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAAccc                                                                                                      <  2:109484/150‑1 (MQ=255)
                                                   aTTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcgc                                                                                                    <  2:1317100/150‑1 (MQ=255)
                                                   aTTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcgc                                                                                                    >  1:2199209/1‑150 (MQ=255)
                                                         cGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACCCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTAc                                                                                              >  1:2723788/1‑150 (MQ=255)
                                                          ggCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACa                                                                                             >  2:1070067/1‑150 (MQ=255)
                                                            cAGACGAGCCAGCTGGGCGGGCCCAGCTACGTGAAGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCCTTCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccgg                                                                                           <  2:2723783‑M1/150‑61 (MQ=255)
                                                                tGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAAc                                                                                       <  2:342330/150‑1 (MQ=255)
                                                                 gAGCCAGCTGGGCGGGCCGAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCCACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAAcc                                                                                      >  2:2055353/1‑150 (MQ=255)
                                                                 gAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAAcc                                                                                      >  2:533211/1‑150 (MQ=255)
                                                                  aGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCACCCg                                                                                     >  2:548332/1‑150 (MQ=255)
                                                                    gtaGCTGGGCCCGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGc                                                                                                                                                 <  2:1450012/86‑1 (MQ=38)
                                                                    gtaGCTGGGCCCGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGc                                                                                                                                                 >  1:1450012/3‑88 (MQ=38)
                                                                    ccAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCggg                                                                                                             <  1:1197981/124‑1 (MQ=255)
                                                                    ccAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCa                                                                                   >  1:749408/1‑150 (MQ=255)
                                                                    ccAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCa                                                                                   >  2:2276136/1‑150 (MQ=255)
                                                                     cAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgc                                                                                                                <  1:1310367/120‑1 (MQ=255)
                                                                         tGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCCTTCGCGGGTAAgcccgctcctacaggggatgcggtt                                                                                                                              >  1:2761339‑M1/1‑77 (MQ=255)
                                                                         tGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCCTTCGCGGGTAAgcccgctcctacaggggatgcggtt                                                                                                                              <  2:2761339‑M1/102‑26 (MQ=255)
                                                                             cgggcCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCTCTTCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgta                                                                          <  1:804410‑M1/150‑78 (MQ=255)
                                                                                  ccAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCCTCCCCGCCCTCCTCGCGACCAAACCCGCGCCTACGGGCAACCCCATCCCCTGCAGgcgc                                                                     >  1:2979873/1‑150 (MQ=38)
                                                                                  ccAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAg                                                                         <  2:1528993/146‑1 (MQ=255)
                                                                                  ccAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAg                                                                         >  1:1528993/1‑146 (MQ=255)
                                                                                  ccAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGc                                                                     <  2:1811035/150‑1 (MQ=255)
                                                                                    aGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTa                                                                                               <  1:1756564/122‑1 (MQ=255)
                                                                                    aGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAANGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCCGCCTCCTCGCCGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCgg                                                                   >  1:2478023/1‑150 (MQ=255)
                                                                                      cTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCaa                                                                                        >  1:293597/1‑127 (MQ=255)
                                                                                       tACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGTCt                                                                >  1:441151/1‑150 (MQ=255)
                                                                                          cgctggccctatggggtgagcggcttttttgtttggctttgCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTAc                                                             >  2:2664133‑M1/42‑150 (MQ=255)
                                                                                          cTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCgg                                                                                                                         <  1:1636187/90‑1 (MQ=255)
                                                                                          cTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCttac                                                             <  1:841426‑M2/150‑5 (MQ=255)
                                                                                           gctggccctatggggtgagcggcttttttgtttggctttgCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCggg                                                                  <  2:2775265‑M1/104‑1 (MQ=255)
                                                                                           gctggccctatggggtgagcggcttttttgtttggctttgCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCggg                                                                  >  1:2775265‑M1/41‑144 (MQ=255)
                                                                                            gATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgtaggagcgggtttaccc                                                           <  1:1924177‑M1/150‑93 (MQ=255)
                                                                                            gATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATcccc                                                                              >  1:666409/1‑131 (MQ=255)
                                                                                            gATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATcccc                                                                              <  2:666409/131‑1 (MQ=255)
                                                                                             aTGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                              >  2:2658613/1‑98 (MQ=255)
                                                                                             aTGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCgg                                                                                                              <  1:2658613/98‑1 (MQ=255)
                                                                                              tGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGTGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCttacccgc                                                         >  2:2199209‑M2/1‑142 (MQ=255)
                                                                                               gCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgtaggagcggg                                                                  >  1:141613‑M1/1‑55 (MQ=255)
                                                                                               gCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgtaggagcggg                                                                  <  2:141613‑M1/140‑86 (MQ=255)
                                                                                               gCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCttacccgcg                                                        <  1:3015904‑M2/150‑10 (MQ=255)
                                                                                                 aGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcg                                                                                                     >  1:616820/1‑103 (MQ=255)
                                                                                                  gCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCTCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAag                                                     >  2:2923913/1‑150 (MQ=255)
                                                                                                   cTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCgg                                                                   >  1:1019208/1‑135 (MQ=255)
                                                                                                    tGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAagag                                                   >  1:2814128/1‑150 (MQ=255)
                                                                                                       aCTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgc                                                                                                                <  2:1256943/86‑1 (MQ=255)
                                                                                                          tgagcggcttttttgtttggctttgCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCTCGAAGAGGCCg                                               >  2:1808009‑M1/26‑148 (MQ=255)
                                                                                                          cctccAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGc                                             >  2:1659562/1‑150 (MQ=255)
                                                                                                            tccAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGc                                                                     >  1:658300/1‑124 (MQ=255)
                                                                                                            tccAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGc                                                                     <  2:658300/124‑1 (MQ=255)
                                                                                                              cAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAg                                         >  1:1005782/1‑150 (MQ=255)
                                                                                                               aGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGc                                        <  1:1070067/150‑1 (MQ=255)
                                                                                                                  aaGCTTTGAATGCAGGCCCGGCCGTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCAGCGGGCGTGGCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaa                                     <  1:533211/150‑1 (MQ=38)
                                                                                                                  aaGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcgc                                                                                                    >  1:1165448/1‑87 (MQ=255)
                                                                                                                  aaGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCcgc                                                                                                    <  2:1165448/87‑1 (MQ=255)
                                                                                                                   aGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaa                                    <  2:1005782/150‑1 (MQ=255)
                                                                                                                      tttGAATGCCGGCCCGGCCCTTTCCCGGGTAAACCCGCTCCTACTGGCAACCGCATCCCCGGCCTCCTCGCGGGCCACCCCGCGCCTACACGCAACCCACTCCCCTGTAAGAGCGGACTTACGCCCGAAGAGGCAGGCAAAGCcacgcat                                 >  2:594802/1‑145 (MQ=255)
                                                                                                                      tttGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAGCCCGCGCATACCGGCAACCGGGTGGCACGCTTCAATTGGCGTACCCGCGAAGAGGCCGGCAAAGCcaaacaa                                 >  1:2983546/1‑150 (MQ=21)
                                                                                                                      tttGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaacaa                                 >  2:1234281/1‑150 (MQ=255)
                                                                                                                      tttGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaacaa                                 >  1:1788849/1‑150 (MQ=255)
                                                                                                                       ttGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCcaaacaaa                                >  2:2986393/1‑150 (MQ=255)
                                                                                                                             gCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGACAACCGCATCCTCTGTAGGAGCGGGCTTACCCGCGAAGAGGACGGCAAAGCCAAACAAAAAAGcc                          <  2:260038/150‑1 (MQ=255)
                                                                                                                               aGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGa                                                                       <  1:51628/103‑1 (MQ=255)
                                                                                                                               aGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGa                                                                       >  2:51628/1‑103 (MQ=255)
                                                                                                                                ggcccggcccTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCgg                                                                   <  2:1058758/106‑1 (MQ=255)
                                                                                                                                    CGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTa                                                                          <  1:2767394‑M1/95‑1 (MQ=255)
                                                                                                                                     GGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCAccc                  <  1:2313506‑M1/150‑1 (MQ=255)
                                                                                                                                        CCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgcg                                                                                                               >  2:1244012‑M1/1‑54 (MQ=255)
                                                                                                                                        CCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTcgcg                                                                                                               <  1:1244012‑M1/54‑1 (MQ=255)
                                                                                                                                        CCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCAt               <  2:1830870‑M1/150‑1 (MQ=255)
                                                                                                                                        CCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCAt               <  1:501242‑M1/150‑1 (MQ=255)
                                                                                                                                         cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGa                                                                       <  1:90118/93‑1 (MQ=255)
                                                                                                                                         cTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGa                                                                       >  2:90118/1‑93 (MQ=255)
                                                                                                                                          tttCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCg                         <  1:548590/138‑1 (MQ=255)
                                                                                                                                           ttCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgtaggagcgggtttacccgcgaaagggccgggcctgcattcaaagctttctggaggagtc                 <  2:743597‑M1/145‑135 (MQ=255)
                                                                                                                                           ttCGCGGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgtaggagcgggtttacccgcgaaagggccgggcctgcattcaaagctttctggaggagtc                 >  1:743597‑M1/1‑11 (MQ=255)
                                                                                                                                           ttCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAgg            <  2:2086873/150‑1 (MQ=255)
                                                                                                                                              gcgGGTAAgcccgctcctacaggggatgcggttgcctgtaggcgcgggtttgcccgcgaggaggccggggatgcggttgcccgtag                                                                         >  1:1837866‑M1/1‑8 (MQ=255)
                                                                                                                                                gggTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCttacccgcgaaagggccgggcctgcattcaaagctttctggaggagtccagctgcatc       <  1:1924177‑M2/150‑59 (MQ=255)
                                                                                                                                                gggTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAg       >  2:2696435/1‑150 (MQ=255)
                                                                                                                                                  gTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAATAAAAAAGCCGCTCACCCCATAGGGCCAGCg     <  1:1659562/150‑1 (MQ=255)
                                                                                                                                                   tAAACCCGCTCCTACGAGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCgg    <  1:1381768/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AAGTGGAGTGCCAGCCGACCGAGTGCCTACGTGGCCAGCCGGGCCGGCTGGATTCGCCGGCAGATGAGCCAGCTGGGCGGGCCCAGCTACCTGATGCAGCTGGACTCCTCCAGAAAGCTTTGAATGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCT  >  NC_002947/5827732‑5828030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.