New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6077877 =111 (0.970)3 (0.030) 3/196 NT 4.2% intergenic (‑123/+115) PP_5329/PP_5330 phosphate ABC transporter substrate‑binding protein/MFS transporter
?NC_002947 6077977 = 49 (0.530)intergenic (‑223/+15) PP_5329/PP_5330 phosphate ABC transporter substrate‑binding protein/MFS transporter
Rejected: Frequency below/above cutoff threshold.

Only 100 of 136 total aligned reads displayed.

GGCCGCCATCAAACGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCAC  >  NC_002947/6077728‑6078024
                                                                                                                                                     |                                                                                                                                                   
tctttggcgggctgacgccgatggtggtgaccgcactgctgaaggtgagcccgatggcgcctgcctactacgtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctac                                                                                                                                                     >  1:274714‑M1/150‑150 (MQ=255)
  tttggcgggctgacgccgatggtggtgaccgcactgctgaaggtgagcccgatggcgcctgcctactacgtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatatgcgcttcggctaCTg                                                                                                                                                   >  2:734821‑M1/148‑150 (MQ=255)
   cgccATCAAACGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTgg                                                                                                                                                  <  1:1625689/150‑1 (MQ=255)
    tggcgggctgacgccgatggtcgtgaccgcactgctgaaggtgagcccgatggcgcctgcctactacgtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatccgcgcttcggctaCTGGc                                                                                                                                                 >  2:1576282‑M1/146‑150 (MQ=255)
     ccATCAAACGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGcc                                                                                                                                                >  2:2695168/1‑150 (MQ=255)
          aaaCGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCctc                                                                                                                                              >  2:1641491/1‑147 (MQ=255)
          aaaCGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCctc                                                                                                                                              <  1:1641491/147‑1 (MQ=255)
           aaCGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTcg                                                                                                                                          <  1:351704/150‑1 (MQ=255)
            aCGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTcgc                                                                                                                                         <  1:1972784/150‑1 (MQ=255)
              gCTTCAGTTTCATGCCTTGCTCCTAGCATGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCgg                                                                                                                                       <  1:2608/150‑1 (MQ=255)
              gCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCgg                                                                                                                                       <  2:850029/150‑1 (MQ=255)
              gCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCgg                                                                                                                                       >  1:1597875/1‑150 (MQ=255)
              gCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCgg                                                                                                                                       >  1:1663289/1‑150 (MQ=255)
                 ccgatggtggtgaccgcactgctgaaggtgagcccgatggcgcctgcctactacgtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGCTa                                                                                                                                    <  1:723688‑M1/18‑1 (MQ=255)
                  cAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTaa                                                                                                                                   >  2:1856977/1‑150 (MQ=255)
                     tttCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGc                                                                                                                                >  1:324283/1‑150 (MQ=255)
                      ggtggtgaccgcactgctgaaggtgagcccgatggcgcctgcctactacgtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGc                                                                                                                                      <  2:2278737‑M1/16‑1 (MQ=255)
                      ggtggtgaccgcactgctgaaggtgagcccgatggcgcctgcctactacgtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGc                                                                                                                                      >  1:2278737‑M1/128‑143 (MQ=255)
                         aTGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGtt                                                                                                                            >  1:364683/1‑150 (MQ=255)
                           ctcTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTcc                                                                                                                          <  1:2806714/148‑1 (MQ=255)
                              ttGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTAGAAGCATGTCTGGCCTCTTCCCGGCTAAGGACGTTcgtcg                                                                                                                       >  2:2806714/1‑146 (MQ=255)
                                gCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAg                                                                                                                     >  1:2237596/1‑150 (MQ=255)
                                   ccTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAgggg                                                                                                                  <  1:2099715/150‑1 (MQ=255)
                                    cTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTaaa                                                                                                                                  <  2:1622017/133‑1 (MQ=255)
                                     tAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGt                                                                                                                <  2:2231853/150‑1 (MQ=255)
                                     tAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGt                                                                                                                >  1:1389350/1‑150 (MQ=255)
                                     tAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGCTCCTACAggttag                                                                                                                >  2:2760643/1‑146 (MQ=255)
                                       gCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGGATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGttt                                                                                                              >  2:708263/1‑150 (MQ=255)
                                       gCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGttt                                                                                                              <  1:1499524/150‑1 (MQ=255)
                                       gCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGttt                                                                                                              <  2:2748780/150‑1 (MQ=255)
                                         aGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGc                                                                                                            >  2:2197207/1‑150 (MQ=255)
                                             atatTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAg                                                                                                        <  1:1856977/150‑1 (MQ=255)
                                               atTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGc                                                                                                      <  1:708263/150‑1 (MQ=255)
                                               atTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGc                                                                                                      <  1:2954640/150‑1 (MQ=255)
                                               atTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGc                                                                                                      <  2:2756602/150‑1 (MQ=255)
                                                ttGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGcc                                                                                                     >  1:2731375/1‑150 (MQ=255)
                                                  ggggTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGc                                                                                                      >  2:2329091/1‑147 (MQ=255)
                                                   cgatggcgcctgcctactacgtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGCTAAAg                                                                                                                                 >  2:802623‑M1/99‑119 (MQ=255)
                                                   cgatggcgcctgcctactacgtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGCTAAAg                                                                                                                                 <  1:802623‑M1/21‑1 (MQ=255)
                                                        ttGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGcc                                                                                             <  2:2731375/150‑1 (MQ=255)
                                                        ttGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGcc                                                                                             <  2:2540827/150‑1 (MQ=255)
                                                        ttGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGcc                                                                                             <  1:2589897/150‑1 (MQ=255)
                                                        ttGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGcc                                                                                             >  2:1033739/1‑150 (MQ=255)
                                                          ggatggaACGGGCCCAAGTATCGGCAGGCCGCATGAATACGGTATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCgg                                                                                           <  2:2103045/150‑2 (MQ=255)
                                                            atggaACGGGCCCAAGTATCGTCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGaca                                                                                         >  2:1481505/1‑150 (MQ=255)
                                                             tggaACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGacac                                                                                        <  2:745961/150‑1 (MQ=255)
                                                               gaACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCt                                                                                      <  1:2197207/150‑1 (MQ=255)
                                                                 aCGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGGGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTTCACAGGCCTCAAGGCCGACACCTaa                                                                                    >  1:2240952/1‑150 (MQ=255)
                                                                  cGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAAc                                                                                   <  2:2486013/150‑1 (MQ=255)
                                                                    ggCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCt                                                                                 >  1:1138162/1‑150 (MQ=255)
                                                                      cccAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGc                                                                                              >  2:377684/1‑135 (MQ=255)
                                                                      cccAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGt                                                                               >  1:98113/1‑150 (MQ=255)
                                                                       gtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCtt                                                                                                                                            <  2:2427086‑M1/10‑1 (MQ=255)
                                                                       gtggcaggcctgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCtt                                                                                                                                            >  1:2427086‑M1/79‑88 (MQ=255)
                                                                       ccAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTa                                                                              <  1:1424014/150‑1 (MQ=255)
                                                                         aaGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGc                                                                                                                                                 <  2:1092437/81‑1 (MQ=255)
                                                                         aaGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGc                                                                                                                                                 >  1:1092437/1‑81 (MQ=255)
                                                                           gTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAg                                                                          <  1:382064/150‑1 (MQ=255)
                                                                            tATCGGCAGGCCGCATGAAGACGATTTGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAGGCCGTTCCTACAGGGGGTTTGCACACGCCTCAAGGCCGAGACCTAAGCTGTAGGAGc                                                                         <  2:761867/150‑1 (MQ=255)
                                                                               cGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGc                                                                      <  2:98113/150‑1 (MQ=255)
                                                                               cGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGc                                                                      <  1:574214/150‑1 (MQ=255)
                                                                                ggCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCt                                                                     <  1:1748430/150‑1 (MQ=255)
                                                                                 tgtgcgccgtcggtctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCtt                                                                    <  1:566948‑M1/82‑1 (MQ=255)
                                                                                    gcgccgtcggccgatccgtgtgcctgtccctgctcgccaaaaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGGGCGGCTTTAg                                                                 >  2:1298519‑M1/66‑150 (MQ=255)
                                                                                              tctagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGc                                                                                                                                                 <  2:900563‑M1/5‑1 (MQ=255)
                                                                                              aTACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCt                                                                                 <  2:1523066/124‑1 (MQ=255)
                                                                                              aTACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCt                                                                                 >  1:1523066/1‑124 (MQ=255)
                                                                                                tagccgtgggcctgtacctgctcgccaacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGc                                                     >  2:566948‑M1/54‑150 (MQ=255)
                                                                                                  gATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGc                                                                                                      >  2:116881/1‑99 (MQ=255)
                                                                                                    tatGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTa                                                                              <  2:1664152/121‑1 (MQ=255)
                                                                                                    tatGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTa                                                                              >  1:1664152/1‑121 (MQ=255)
                                                                                                       gACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGc                                                                                              <  2:448711/102‑1 (MQ=255)
                                                                                                       gACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCGGGCCTCTTCGCGGCTAAAg                                                                                                                                 <  2:382093/67‑1 (MQ=255)
                                                                                                       gACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCGGGCCTCTTCGCGGCTAAAg                                                                                                                                 >  1:382093/1‑67 (MQ=255)
                                                                                                          ttCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCtt                                                                    <  2:162775/125‑1 (MQ=255)
                                                                                                          ttCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCtt                                                                    >  1:162775/1‑125 (MQ=255)
                                                                                                          ttCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGa                                           >  2:936711/1‑150 (MQ=255)
                                                                                                                   aCAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAagag                                                       <  1:3002072/129‑1 (MQ=255)
                                                                                                                   aCAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAagag                                                       >  2:3002072/1‑129 (MQ=255)
                                                                                                                    cAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAaga                                                        <  2:1283619/127‑1 (MQ=255)
                                                                                                                    cAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAaga                                                        >  1:1283619/1‑127 (MQ=255)
                                                                                                                      aTTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAg                               >  2:761064/1‑150 (MQ=255)
                                                                                                                          aacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGCTAAAGcc                                                                                                                               >  1:530538‑M1/28‑50 (MQ=255)
                                                                                                                          aacaagcgctgatctgcgcttcggctaCTGGCCTCTTCGCGGCTAAAGcc                                                                                                                               <  2:530538‑M1/23‑1 (MQ=255)
                                                                                                                             gAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTAAACACAAGCCTCAAGGCCGACACCTAACCTCTAGGAGCGGCTGTATTTGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCttgt                        >  2:2648363/1‑150 (MQ=255)
                                                                                                                              aaaGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAAc                                                                                   >  1:2752878/1‑90 (MQ=255)
                                                                                                                                aGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGcc                                                                                             <  2:2759468/78‑1 (MQ=255)
                                                                                                                                  gCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAAc                                                                                   >  1:2055356/1‑86 (MQ=255)
                                                                                                                                  gCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAAc                                                                                   <  2:2055356/86‑1 (MQ=255)
                                                                                                                                  gCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCACCGCTTGTTTGCg                   >  2:2962345/1‑150 (MQ=255)
                                                                                                                                     aTCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGaca                                                                                         <  1:2658524/77‑1 (MQ=255)
                                                                                                                                     aTCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGc                <  1:1033739/150‑1 (MQ=255)
                                                                                                                                      tCACTGGAAGCAGGTCTGACATCATCGTGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCa               <  2:2240952/150‑1 (MQ=255)
                                                                                                                                         cTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAgg                                                                                               >  1:977075/1‑67 (MQ=255)
                                                                                                                                         cTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAgg                                                                                               <  2:977075/67‑1 (MQ=255)
                                                                                                                                            gAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACa         >  2:1981795/1‑150 (MQ=255)
                                                                                                                                             aaGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAg        >  2:2641204/1‑150 (MQ=255)
                                                                                                                                              aGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAgg       <  1:936711/150‑1 (MQ=255)
                                                                                                                                               gCAGGTCTGGCCTCTTCGCGGCTAACGGTATGCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGc      >  1:2384666/1‑150 (MQ=255)
                                                                                                                                                   gTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCAc  >  2:2172373/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GGCCGCCATCAAACGCTTCAGTTTCATGCCTTGCTCCTAGCAGGAATATTGGGGTGTTGGATGGAACGGGCCCAAGTATCGGCAGGCCGCATGAATACGATATGACTTCATTGTGACAATTGGATGAAAGGCCATCACTGGAAGCAGGTCTGGCCTCTTCGCGGCTAAAGCCGTTCCTACAGGGGGTTTGCACAGGCCTCAAGGCCGACACCTAACCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCAGTAGCCGAAGCGCAGATCAGCGCTTGTTGGCGAGCAGGTACAGGCCCAC  >  NC_002947/6077728‑6078024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.