New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1149934 =97 (0.850)7 (0.070) 6/220 NT 8.0% intergenic (‑175/+82) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
?NC_002947 1149995 = 73 (0.710)intergenic (‑236/+21) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase

Only 100 of 111 total aligned reads displayed.

ATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGGCATCGAAGATC  >  NC_002947/1149846‑1150142
                                                                                                                                                      |                                                                                                                                                   
aTTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAgg                                                                                                                                                     <  2:2839951/150‑1 (MQ=255)
 ttGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                                                                                    <  1:1405244/150‑1 (MQ=255)
 gacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                                                                                    >  1:2419183‑M1/88‑150 (MQ=255)
      gTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTc                                                                                                                                               >  1:893884/1‑150 (MQ=255)
         aCTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                                                                                                            <  1:1589519/150‑1 (MQ=255)
          cTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCcac                                                                                                                                           <  1:738995/150‑1 (MQ=255)
             gATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACg                                                                                                                                        <  2:1307962/150‑1 (MQ=255)
               tGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACggg                                                                                                                                      <  2:1118140/150‑1 (MQ=255)
                  cGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGCGTcg                                                                                                                                   >  1:2164702/1‑150 (MQ=255)
                   gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                                                                                  <  1:1193492/150‑1 (MQ=255)
                     ttGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                                                                                                                <  2:2978830/150‑1 (MQ=255)
                        cTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGAGATCCCGGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgcgagat                                                                                                                             >  1:2383546/1‑146 (MQ=255)
                         tttttttGGGAGCAACTGTCTTGCTCAATTTATAAAAGCTGGTGCGATCCCTGGGGGAGCGGGCTTGCACGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagc                                                                                                                            >  2:529641/1‑150 (MQ=255)
                                  gAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGt                                                                                                                   <  1:1171624/150‑1 (MQ=255)
                                      aaCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAg                                                                                                               >  2:2625457/1‑150 (MQ=255)
                                       aCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGGGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgc                                                                                                              >  1:2669628/1‑150 (MQ=255)
                                         tGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgcgc                                                                                                            >  1:2220167/1‑150 (MQ=255)
                                             ttGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCCGCGCCAgg                                                                                                        >  2:1148015/1‑150 (MQ=255)
                                             ttGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAgg                                                                                                        <  1:2591950/150‑1 (MQ=255)
                                                 tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                                                                                  >  1:477122/1‑120 (MQ=255)
                                                 tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                                                                                  <  2:477122/120‑1 (MQ=255)
                                                 tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGt                                                                                                    >  2:2670856/1‑150 (MQ=255)
                                                 tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTCCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACCGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCGGCGCCAGGCAGt                                                                                                    >  1:2007339/1‑150 (MQ=255)
                                                  cAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt                                                                                                   <  1:1486161/150‑1 (MQ=255)
                                                   aaTTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCATACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTg                                                                                                  >  2:1671828/1‑150 (MQ=255)
                                                   aaTTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTg                                                                                                  >  2:935824/1‑150 (MQ=255)
                                                    aTTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGt                                                                                                 <  2:2861443/150‑1 (MQ=255)
                                                     tttCTAACAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACCCGGGCGCCGCTGCCTGTCAT‑GACCTCGGTGTTGGCTTCGCTGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTc                                                                                                <  1:699936/150‑1 (MQ=25)
                                                     tttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                                                                                                       <  1:1685969/111‑1 (MQ=255)
                                                     tttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                                                                                                       >  2:1685969/1‑111 (MQ=255)
                                                     tttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTc                                                                                                <  2:1610380/150‑1 (MQ=255)
                                                      ttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTcc                                                                                               <  2:2220167/150‑1 (MQ=255)
                                                       tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                                                                              <  1:1063917/150‑1 (MQ=255)
                                                          aaaaGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCa                                                                                           <  1:503357/150‑1 (MQ=255)
                                                           aaaGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCAt                                                                                          >  1:1796002/1‑150 (MQ=255)
                                                                   cgcgATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGc                                                                                  <  1:466679/150‑1 (MQ=255)
                                                                   cgcgATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGc                                                                                  <  1:2683932/150‑1 (MQ=255)
                                                                    gcgATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATc                                                                                         <  2:14781/142‑1 (MQ=255)
                                                                          ccTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAccc                                                                           >  2:2830603/1‑150 (MQ=255)
                                                                           cctggggAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGc                                                                                  <  2:1940913/139‑1 (MQ=255)
                                                                           cTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAcccc                                                                          <  1:167766/150‑1 (MQ=255)
                                                                                   gCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACCCGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt                                                                  <  1:1457030/150‑1 (MQ=255)
                                                                                   gCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt                                                                  >  2:2834895/1‑150 (MQ=255)
                                                                                   gCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt                                                                  >  2:2140186/1‑150 (MQ=255)
                                                                                       gccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTc                                                               >  1:2419183‑M2/64‑150 (MQ=255)
                                                                                       gCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCa                                                              <  2:1796002/150‑1 (MQ=255)
                                                                                           GCCAGCGAACACGGGCGAATC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATAcc                                                          >  1:2054671‑M1/1‑150 (MQ=255)
                                                                                            CCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCa                                                         >  1:2625457‑M1/1‑150 (MQ=255)
                                                                                             CCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCAc                                                                       <  1:20619‑M1/135‑1 (MQ=255)
                                                                                             CCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAg                                                        >  1:2834895‑M1/1‑150 (MQ=255)
                                                                                              ccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCa                                                                                                      <  1:1546555‑M2/48‑1 (MQ=255)
                                                                                              ccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCa                                                                                                      >  2:1546555‑M2/57‑104 (MQ=255)
                                                                                              ccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAg                                                        >  1:1563652‑M2/57‑150 (MQ=255)
                                                                                              CGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAgg                                                       <  2:1360803‑M1/150‑1 (MQ=255)
                                                                                               GCGAACACGGGCGAAGC‑ACGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGGCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGc                                                      <  2:2731278‑M1/150‑1 (MQ=255)
                                                                                                gcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagCCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGc                                                      >  2:3066559‑M2/55‑150 (MQ=255)
                                                                                                  AACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCATACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAg                                                   >  1:1671828‑M1/1‑150 (MQ=255)
                                                                                                       gggCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGt                                                                                                                   >  1:1964997/1‑81 (MQ=255)
                                                                                                       gggCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGt                                                                                                                   <  2:1964997/81‑1 (MQ=255)
                                                                                                       gggCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCt                                              >  2:414260/1‑150 (MQ=255)
                                                                                                        ggCGAAGC‑CCGTGCCATCCACCTCGGTGTTGGTGTCGCGGGCAAGCCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCtt                                             <  2:2164702/150‑1 (MQ=255)
                                                                                                          gtaaGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGa                                           <  2:1307173/148‑1 (MQ=255)
                                                                                                              gtggtggatggcacgggcttcgcccgtgttcgcgggcaagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCa                                        >  1:2789905‑M2/41‑150 (MQ=255)
                                                                                                                 ccGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCa                                                              <  1:1073869/125‑1 (MQ=255)
                                                                                                                    tGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCagccagcc                                                                                                                       <  2:2176834/65‑1 (MQ=255)
                                                                                                                    tGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCagccagcc                                                                                                                       >  1:2176834/1‑65 (MQ=255)
                                                                                                                     gCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGACGAGACAGGCAGTTGTCCAGCGTCCCGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGccc                                 <  1:1148015/150‑1 (MQ=255)
                                                                                                                        gcacgggcttcgcccgtgttcgcgggcaagCCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCCtt                              <  1:3066559‑M2/120‑1 (MQ=255)
                                                                                                                        aTCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCTCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGtt                              <  1:2830603/150‑1 (MQ=255)
                                                                                                                        aTCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATc                                                                                         >  1:250453/1‑91 (MQ=255)
                                                                                                                        aTCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATc                                                                                         <  2:250453/91‑1 (MQ=255)
                                                                                                                         tCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGc                                                                                  >  2:1879951/1‑97 (MQ=255)
                                                                                                                         tCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGc                                                                                  <  1:1879951/97‑1 (MQ=255)
                                                                                                                         tCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGt                                                                <  2:1254661/115‑1 (MQ=255)
                                                                                                                         tCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGt                                                                >  1:1254661/1‑115 (MQ=255)
                                                                                                                         tCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCATCACCTTGAGCATCCGCCCGTTg                             <  1:2718801/150‑1 (MQ=255)
                                                                                                                         tCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTg                             >  1:1071764/1‑150 (MQ=255)
                                                                                                                         tCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTg                             >  2:514774/1‑150 (MQ=255)
                                                                                                                            accacGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGcc                          >  2:1350427/1‑150 (MQ=255)
                                                                                                                             ccacGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGccc                         <  1:2975535/150‑1 (MQ=255)
                                                                                                                                   tgtTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCa                                                    >  1:2927860/1‑117 (MQ=255)
                                                                                                                                   tgtTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCa                                                    <  2:2927860/117‑1 (MQ=255)
                                                                                                                                     ttGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATgg                 >  2:910166/1‑150 (MQ=255)
                                                                                                                                        gCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCCTACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTg              >  2:405141/1‑150 (MQ=255)
                                                                                                                                        gCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGt                               >  2:2406765/1‑133 (MQ=255)
                                                                                                                                        gCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGt                               <  1:2406765/133‑1 (MQ=255)
                                                                                                                                        gCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTg              >  1:402771/1‑150 (MQ=255)
                                                                                                                                         cTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCg                                                                    >  1:340049/1‑95 (MQ=255)
                                                                                                                                         cTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTgg             >  1:1420563/1‑150 (MQ=255)
                                                                                                                                         cTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTgg             <  1:935824/150‑1 (MQ=255)
                                                                                                                                         cTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTgg             >  2:2396621/1‑150 (MQ=255)
                                                                                                                                            cgcgggcaagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGGCAt          <  2:1563652‑M2/140‑1 (MQ=255)
                                                                                                                                             gcgggcaagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGGCATc         <  1:529641‑M2/141‑1 (MQ=255)
                                                                                                                                             gcgggcaagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGGCATc         >  2:2741343‑M2/10‑150 (MQ=255)
                                                                                                                                                   aagGCCGCTCCCACACGGGTCTCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATc                                                                                         <  1:58354‑M2/61‑1 (MQ=255)
                                                                                                                                                   aagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATc                                                                                         >  2:58354‑M2/4‑64 (MQ=255)
                                                                                                                                                   aagGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGGCATCGAAGAt   >  1:1999411‑M2/4‑150 (MQ=255)
                                                                                                                                                    agGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGGCATCGAAGATc  <  2:438520‑M2/148‑1 (MQ=255)
                                                                                                                                                      gCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAg                                                                                                     <  1:2040735/49‑1 (MQ=255)
                                                                                                                                                      gCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAg                                                                                                     >  2:2040735/1‑49 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
ATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCATACCAGGCCAGCACCTTGAGCATCCGCCCGTTGGCCCGGGTATGGTTGGCATCGAAGATC  >  NC_002947/1149846‑1150142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.