New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1653990 =102 (0.890)7 (0.060) 6/234 NT 6.6% coding (2821/4527 nt) PP_1449 hypothetical protein
?NC_002947 1654020 = 100 (0.910)coding (2791/4527 nt) PP_1449 hypothetical protein

Only 100 of 132 total aligned reads displayed.

TGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCGGGCGAAGCTTGCT  >  NC_002947/1653873‑1654169
                                                                                                                                                   |                                                                                                                                                     
tGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAgtg                                                                                                                                                     <  1:853641/150‑1 (MQ=255)
 ccgcgtgggggccgatatggcggtcgaacaagtcaagcgcctggaaaacgagcgccgtggaattgctcaggtcagcgagtggtccgcagcaaaggtcgcggtcaaggctgacacgcTGGCCCGCCAGGCTGTGCCCTGGTCGGCCagtgg                                                                                                                                                    >  2:1137854‑M1/117‑149 (MQ=255)
   tGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAgtgtgt                                                                                                                                                  <  1:2052873/150‑1 (MQ=255)
     gtgtCCAGGCGCGCATCGCCCCCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCa                                                                                                                                                >  1:2916195/1‑150 (MQ=255)
     gtgtCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCCCCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCAGGCATTGGCCCGTCGGGCTGTGCCCTGGTCGGCCAGTGTGTct                                                                                                                                                >  2:246089/1‑149 (MQ=255)
     gtgggggccgacatgacggtcgaacacctcaagcgcctggaaaaccagcgccgtggaattgctcaggtcagcgagttgtccgcagcaaaggtcgaggtcaaggctgacacacTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCa                                                                                                                                                >  1:35437‑M1/113‑150 (MQ=255)
       gtCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGc                                                                                                                                              >  2:972846/1‑150 (MQ=255)
          gaGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCtt                                                                                                                                           >  1:2892308/2‑150 (MQ=255)
                    tCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGAcc                                                                                                                                 <  2:948813/150‑1 (MQ=255)
                        caccaTAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTtg                                                                                                                             <  2:1507716/150‑1 (MQ=255)
                           caTAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGAcc                                                                                                                                 <  1:2221933/143‑1 (MQ=255)
                           caTAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCt                                                                                                                                <  2:2439308/144‑1 (MQ=255)
                            aTAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCttt                                                                                                                              <  2:2073551/145‑1 (MQ=255)
                             tAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCg                                                                                                                        <  2:2641796/150‑1 (MQ=255)
                             tAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCg                                                                                                                        <  2:26764/150‑1 (MQ=255)
                              aGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAgt                                                                                                                                                      >  1:3066097/1‑119 (MQ=255)
                              aGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAgt                                                                                                                                                      <  2:3066097/119‑1 (MQ=255)
                               ggCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGa                                                                                                                      <  1:89652/150‑1 (MQ=255)
                                   aGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGa                                                                                                                                   <  2:803719/133‑1 (MQ=255)
                                   aGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAAc                                                                                                                  >  2:1597663/1‑150 (MQ=255)
                                             cGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCt                                                                                                        <  1:2483533/150‑1 (MQ=255)
                                                       cTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTTACCTCGACCTTTGCTGCGGACAACTCGCTg                                                                                                            >  2:2646601/1‑136 (MQ=255)
                                                       cTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACaa                                                                                                                   <  1:1467364/129‑1 (MQ=255)
                                                       cTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACaa                                                                                                                   >  2:1467364/1‑129 (MQ=255)
                                                       cTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTg                                                                                                            <  1:2646601/136‑1 (MQ=255)
                                                        tGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCtt                                                                                                                                           <  2:1481158/104‑1 (MQ=255)
                                                        tGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCtt                                                                                                                                           >  1:1481158/1‑104 (MQ=255)
                                                          ggTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACg                                                                                           <  2:2916195/150‑1 (MQ=255)
                                                            gaattgctcaggtcagcgagttgtccgcagcaaaggtcgaggtcaaggctgacacatTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTc                                                                                                                                     <  2:2623887‑M1/49‑1 (MQ=255)
                                                              ttttCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGgcgc                                                                                       >  2:2653397/1‑150 (MQ=255)
                                                                ttCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTg                                                                                     <  2:1187224/150‑1 (MQ=255)
                                                                         gcTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAg                                                                            <  1:2653397/150‑1 (MQ=255)
                                                                           tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAgt                                                                                                                                                      <  1:950220/74‑1 (MQ=255)
                                                                           tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAatgc                                                                                                                                                    <  2:2711071/76‑2 (MQ=255)
                                                                           tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAAtt                                                                                                >  1:1400505/1‑128 (MQ=255)
                                                                           tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAAtt                                                                                                <  2:1400505/128‑1 (MQ=255)
                                                                           tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGgc                                                                          >  1:335409/1‑150 (MQ=255)
                                                                           tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGgc                                                                          >  2:934908/1‑150 (MQ=255)
                                                                           tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGgc                                                                          >  2:915037/1‑150 (MQ=255)
                                                                             aCCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGACCTGGTCGGCCCGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGgcgc                                                                        >  2:521168/1‑150 (MQ=255)
                                                                             aCCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCACGCCAGGCTGTGCCCTGGTCGGCCAGTGTAAGAGTCTGTACCTCGACATTGGCTGCGGACAAGGCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGgcgc                                                                        >  2:729301/1‑150 (MQ=255)
                                                                              ccTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTg                                                                                     >  1:1829000/1‑136 (MQ=255)
                                                                              ccTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTg                                                                                     <  2:1829000/136‑1 (MQ=255)
                                                                              ccTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCAACATTTGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCt                                                                       >  1:3022119/1‑150 (MQ=255)
                                                                               cTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACGTCGCTTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCtt                                                                      >  1:809790/1‑150 (MQ=255)
                                                                               cTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGtttt                                                                                >  1:1105977/1‑140 (MQ=255)
                                                                               cTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGtttt                                                                                <  2:1105977/140‑1 (MQ=255)
                                                                                    gctgcggtGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGTCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGgt                                                                 <  2:3046534/150‑1 (MQ=255)
                                                                                       gctgcGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGtt                                                              <  1:991233/150‑1 (MQ=255)
                                                                                          gcgcCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGa                                                           >  2:1957775/1‑150 (MQ=255)
                                                                                            atcTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGAcc                                                         <  1:1440340/148‑1 (MQ=255)
                                                                                             ccTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCa                                                                                             >  1:2502205/1‑113 (MQ=255)
                                                                                             ccTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCa                                                                                             <  2:2502205/113‑1 (MQ=255)
                                                                                              cTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTc                                                                               >  2:1252448/1‑126 (MQ=255)
                                                                                              cTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTc                                                                               <  1:1252448/126‑1 (MQ=255)
                                                                                               tCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTc                                                      >  1:1256795/1‑150 (MQ=255)
                                                                                               tCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTc                                                      <  1:972846/150‑1 (MQ=255)
                                                                                                cGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTcc                                                     >  2:3065949/1‑149 (MQ=255)
                                                                                                 gATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGGGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACCTCTTGCTGCCAAGGGGATGCGCAGCGCGCCGAGGGTCCAGGCGCTCGAGGTGTTCGACCgagat                                                    >  2:1440340/1‑146 (MQ=255)
                                                                                                  gaggtcaaggctgacacactggccgaccagggcacagcctggcgggccaATGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTc                                                                                               >  1:2623887‑M2/50‑106 (MQ=255)
                                                                                                  gaggtcaaggctgacacactggccgaccagggcacagcctggcgggccaATGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTc                                                                                               <  2:2623887‑M2/57‑1 (MQ=255)
                                                                                                      tCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCATCATGTCgg                                               <  1:2936522/150‑1 (MQ=255)
                                                                                                         gCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGATTGAGGTGTTCGACCGTCATGTCGGccc                                            <  1:2388543/150‑1 (MQ=255)
                                                                                                             tgacacactggccgaccagggcacagcctggcgggccaGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCAc                                        >  1:35437‑M2/39‑150 (MQ=255)
                                                                                                              ccGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTTACCTCGACCTTTGCTGCGGACAACGCGCTGACCTGAGCAATTCCACGGCGCTGGCTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACg                                       >  2:645266/1‑150 (MQ=255)
                                                                                                               cGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCTACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCTTGTAGGCCCCCACGc                                      >  2:1046356/1‑150 (MQ=255)
                                                                                                               cGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGc                                      >  2:1045565/1‑150 (MQ=255)
                                                                                                                 ccactggccgaccagggcacagcctggcgggccaGCGTGTCAGCCTTGACCGCGACCTTTGCTGCGGACCACTCGCTGACCTGAGCAATTCCACGGCGCTCGTTTTCCAGGCGCTTGACTTGTTCGACCGCCATATCGGCCCCCAcgcgg                                    >  2:1137854‑M2/35‑148 (MQ=255)
                                                                                                                   aTTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTc                                                                               <  1:1964505/105‑1 (MQ=255)
                                                                                                                      ggccgaccagggcacagcctggcgggccaGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGa                                                                                                      >  1:964820‑M2/30‑79 (MQ=255)
                                                                                                                      ggccgaccagggcacagcctggcgggccaGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGa                                                                                                      <  2:964820‑M2/50‑1 (MQ=255)
                                                                                                                       GCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGgcgc                                                                                       >  2:210909‑M1/1‑93 (MQ=255)
                                                                                                                       GCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGgcgc                                                                                       <  1:210909‑M1/93‑1 (MQ=255)
                                                                                                                       GCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGt                              <  1:527041‑M1/150‑1 (MQ=255)
                                                                                                                        CCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCAt                                                    <  2:2070951‑M1/127‑1 (MQ=255)
                                                                                                                        CCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCAt                                                    >  1:2070951‑M1/1‑127 (MQ=255)
                                                                                                                         cgaccagggcacagcctggcgggccaATGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCCTTGACCTGATCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTGCGCCCGTCATGTCGGCCCCCGCGCTGGGAGGTGc                            <  1:1137854‑M2/124‑1 (MQ=255)
                                                                                                                         CCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGa                                                                    >  2:549892‑M1/1‑110 (MQ=255)
                                                                                                                         CCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGa                                                                    <  1:549892‑M1/110‑1 (MQ=255)
                                                                                                                           gCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCa                          >  1:2043170/1‑150 (MQ=255)
                                                                                                                            ccAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCAt                         >  1:1142353/1‑150 (MQ=255)
                                                                                                                               ggCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGTCCCCACGCTGGGAGGTGCCATGGc                      <  2:117968/150‑1 (MQ=255)
                                                                                                                                    tgCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCtt                 >  2:2269906/1‑150 (MQ=255)
                                                                                                                                     gCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTc                <  2:375143/150‑1 (MQ=255)
                                                                                                                                      cccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAg                                                                            >  2:978796/1‑89 (MQ=255)
                                                                                                                                      cccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCg                                                >  2:476888/1‑117 (MQ=255)
                                                                                                                                      cccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCg                                                <  1:476888/117‑1 (MQ=255)
                                                                                                                                      cccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTgg                                   >  2:1121220/1‑130 (MQ=255)
                                                                                                                                      cccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTgg                                   <  1:1121220/130‑1 (MQ=255)
                                                                                                                                      cccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTg                                    <  1:747151/129‑1 (MQ=255)
                                                                                                                                      cccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTg                                    >  2:747151/1‑129 (MQ=255)
                                                                                                                                       ccTGGTCGGCCAGTGTGTCAGCCTTTACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCgg              >  2:274867/1‑150 (MQ=255)
                                                                                                                                       ccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCgg              <  2:611379/150‑1 (MQ=255)
                                                                                                                                       ccTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCgg              >  1:673143/1‑150 (MQ=255)
                                                                                                                                        cTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGt                              >  2:153284/1‑133 (MQ=255)
                                                                                                                                        cTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGt                              <  1:153284/133‑1 (MQ=255)
                                                                                                                                         tGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCGGGc            >  1:638130/1‑150 (MQ=255)
                                                                                                                                         tGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCGGGc            >  1:3018679/1‑150 (MQ=255)
                                                                                                                                            tctgccaGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTTGTTTTCCAGGCGCTTGAGGTCTTCGACCGTCATGTCGGGCTCCACGCTGGGAGGTGCCATGGCGTCTTCGGGCGaa         <  1:246089‑M2/143‑1 (MQ=255)
                                                                                                                                                   gtgtgtCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCGGGCGAAGCTTGCt  >  1:2913514/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
TGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCGGGCGAAGCTTGCT  >  NC_002947/1653873‑1654169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.