New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 2056021113 (0.990)11 (0.110) 8/212 NT 9.5% intergenic (+27/‑116) aroC/PP_1831 chorismate synthase/membrane protein
?NC_002947 = 2056095 112 (1.130)intergenic (+101/‑42) aroC/PP_1831 chorismate synthase/membrane protein

Only 100 of 145 total aligned reads displayed.

GCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTT  >  NC_002947/2055946‑2056243
                                                                                                                                                     |                                                                                                                                                    
gcAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGTCCTCAGGTTCAGTGACAGGGTGAAATCCGGCTAGGAGCGGGTTc                                                                                                                                                      >  2:693036/1‑150 (MQ=255)
      tGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgc                                                                                                                                                >  1:2992168‑M2/1‑144 (MQ=255)
             gtgAAAGTGAATCCCCCCGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCGGTGACAGGGTGAAATGCGCGTAGGAGCGGGTTCacccgcgaagagg                                                                                                                                         >  1:481591‑M2/1‑137 (MQ=255)
                cAAGTGAATACCCCGGGGCTGGGCCAGCGCTGATACACCTGCAACGGCCTCTTCACGGGTAAACCCACTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGTGCGGGGTCacccgcgaagaggccg                                                                                                                                      <  1:1360824‑M2/150‑17 (MQ=255)
                 aaGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAACCCCGCTCCTACATTTGGATACCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAggccgg                                                                                                                                     <  1:1959877/150‑1 (MQ=255)
                 aaGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgc                                                                                                                                                <  2:2287744‑M2/139‑7 (MQ=255)
                 aaGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgc                                                                                                                                                >  1:2287744‑M2/1‑133 (MQ=255)
                     gAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGcccc                                                                                                                                 <  2:2101124/150‑2 (MQ=255)
                      aaTACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTCAACTCTCTCGTACATGGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAg                                                                                                                                <  1:2664579/150‑1 (MQ=39)
                      aaTACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAg                                                                                                                                <  2:153991/150‑1 (MQ=255)
                         aCCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCCCCAGGTc                                                                                                                             >  2:2552997/1‑150 (MQ=255)
                           cccGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTccc                                                                                                                           >  1:1036186/1‑150 (MQ=255)
                           cccGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTccc                                                                                                                           >  1:2093361/1‑150 (MQ=255)
                           cccGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTACGCTCAGGGGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTccc                                                                                                                           >  1:1727181/1‑150 (MQ=255)
                           cccGGTGCTGGACCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaa                                                                                                                                             <  2:16556‑M2/132‑10 (MQ=255)
                              ggTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCCCTTCGCGGGTAAACCCGCTCCTACATTGTGATATCACTGCCCCCAGGTGCACTGACAGGGTGAAATCCGCGTAAGCGCGGGGTCACCCGCGAATGGGCCGGCCCAGGTcccccc                                                                                                                        >  2:156012/1‑148 (MQ=255)
                                tGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACaa                                                                                                                      <  2:1543305/150‑1 (MQ=255)
                                      gCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCAc                                                                                                                <  1:2693678/150‑1 (MQ=255)
                                          gcgcTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCAcactg                                                                                                            <  2:2002729/150‑5 (MQ=255)
                                           cgcTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTATGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCAt                                                                                                           <  2:1360824/150‑1 (MQ=255)
                                                 tCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAAc                                                                                                      >  2:2787634/1‑149 (MQ=255)
                                                 tCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAAc                                                                                                      <  1:2787634/149‑1 (MQ=255)
                                                  ccAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAAccc                                                                                                    >  1:309750/1‑150 (MQ=255)
                                                    aaCTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggta                                                                                                  <  2:2543799‑M2/150‑53 (MQ=255)
                                                    aaCTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGTTCCCCACAAGGCCACCCCATGCAACACAt                                                                                                  >  1:1183386/1‑150 (MQ=255)
                                                     aCTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATc                                                                                                 >  1:719200/1‑150 (MQ=255)
                                                      cTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATcc                                                                                                >  1:1379772/1‑150 (MQ=255)
                                                       tGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATc                                                                                                 >  1:1322011/1‑148 (MQ=255)
                                                       tGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATc                                                                                                 <  2:1322011/148‑1 (MQ=255)
                                                            cGGCCTCTGCGCGGGTAAACCCGCTCCTCTATTGGGATATCATTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACt                                                                                          <  2:2804740/150‑1 (MQ=255)
                                                                ctctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcg                                                                                      >  2:618028/1‑150 (MQ=255)
                                                                ctctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcg                                                                                      >  1:932830/1‑150 (MQ=255)
                                                                 tctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAg                                                                                                                     >  1:441400/1‑118 (MQ=255)
                                                                 tctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAg                                                                                                                     <  2:441400/118‑1 (MQ=255)
                                                                 tctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                     >  2:407649/1‑150 (MQ=255)
                                                                 tctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                     <  1:35701/150‑1 (MQ=255)
                                                                  ctTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTccc                                                                                                                           <  2:1379950/111‑1 (MQ=255)
                                                                   ttCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCcac                                                                                                                        >  2:641311/1‑113 (MQ=255)
                                                                   ttCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCcac                                                                                                                        <  1:641311/113‑1 (MQ=255)
                                                                   ttCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCAt                                                                                                           >  2:388187/1‑126 (MQ=255)
                                                                   ttCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCAt                                                                                                           <  1:388187/126‑1 (MQ=255)
                                                                   ttCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCt                                                                                   <  2:1036186/150‑1 (MQ=255)
                                                                   ttCGCGAGTAAACCAGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCt                                                                                   >  2:907097/1‑150 (MQ=255)
                                                                      gcgGGTAAACCCGCTCCTACGTTCGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGGAGGAGCGCGTGCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAGCCCATCCCCTACTGGCGCCTGTc                                                                                <  1:2552997/150‑1 (MQ=255)
                                                                      gcgGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTc                                                                                <  1:299747/150‑1 (MQ=255)
                                                                         ggTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAg                                                                             >  1:988568/1‑150 (MQ=255)
                                                                           tAATCCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCt                                                                           <  1:814662/150‑1 (MQ=255)
                                                                            aaaCCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCtt                                                                          <  2:3040747/150‑1 (MQ=255)
                                                                             aaCCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTc                                                                         <  1:695868/150‑1 (MQ=255)
                                                                               cccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAg                                                                                                                     <  1:1538576/104‑1 (MQ=255)
                                                                               cccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAg                                                                                                                     >  2:1538576/1‑104 (MQ=255)
                                                                                ccGCTCCTACATTGGGATGTCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagtgctggcccagcaccggggtattcacttgcacatcggcattctgcgcac                                                                      <  2:1484642‑M2/150‑81 (MQ=255)
                                                                                ccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagcgctgg                                                                                                                 >  1:1578183‑M2/1‑70 (MQ=255)
                                                                                ccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTAc                                                                      >  1:1958342/1‑150 (MQ=255)
                                                                                 cGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggtattcacttgcacatcggcattctgcgcacg                                                                     >  2:2242590‑M2/1‑69 (MQ=255)
                                                                                   cTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTg                                                                   <  2:1727181/150‑1 (MQ=255)
                                                                                      cTACATTGGTATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCCGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTc                                                                <  1:1669452/150‑1 (MQ=255)
                                                                                      cTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTTacccgcgaa                                                                                                                                             >  1:850241‑M2/1‑64 (MQ=255)
                                                                                      cTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTTacccgcgaa                                                                                                                                             <  2:850241‑M2/73‑10 (MQ=255)
                                                                                      cTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGAGGCCGTAAGGCCCCACAAGGCCACCCCATGCCACCCACCTCCTACTGGCGCCTGTCCAGCTTCTACCTGTTc                                                                >  1:2832696/1‑150 (MQ=255)
                                                                                       tACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACGCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCt                                                                        >  2:2057926/1‑141 (MQ=255)
                                                                                       tACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCt                                                                        <  1:2057926/141‑1 (MQ=255)
                                                                                          aTTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAACTCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTcc                                                                               >  1:2920505/1‑131 (MQ=255)
                                                                                          aTTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTcc                                                                               <  2:2920505/131‑1 (MQ=255)
                                                                                          aTTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTAc                                                                      <  2:2016486/140‑1 (MQ=255)
                                                                                           ttGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAAccc                                                                                                    >  2:351136/1‑109 (MQ=255)
                                                                                           ttGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAAccc                                                                                                    <  1:351136/109‑1 (MQ=255)
                                                                                             gggATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTAc                                                                      <  1:2310365/137‑1 (MQ=255)
                                                                                               gATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGcc                                                       <  2:786908/150‑1 (MQ=255)
                                                                                                   tcccTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCctgc                                                   >  1:3062123/4‑150 (MQ=255)
                                                                                                   tCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggccgttgcagttggatcagtgctggcccagcaccggggtattcacttgcacatcggcattctgcgcacggtggcgcagcaggtggtc                                                   >  1:1484642‑M2/1‑51 (MQ=255)
                                                                                                     aCTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGTGTAGGAGCAGGTTCACGCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCctgctg                                                 <  1:689467/150‑1 (MQ=255)
                                                                                                     aCTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCctgctg                                                 >  1:2826868/1‑150 (MQ=255)
                                                                                                      cTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTgg                                                >  1:2789617/1‑150 (MQ=255)
                                                                                                        gCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGCGTTCCCCAGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGc                                              <  2:2093361/150‑1 (MQ=255)
                                                                                                         cccTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggc                                                                                                                                        <  1:2511658‑M2/59‑15 (MQ=255)
                                                                                                         cccTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCacccgcgaagaggc                                                                                                                                        >  2:2511658‑M2/1‑45 (MQ=255)
                                                                                                           cTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTcc                                           >  2:277093/1‑150 (MQ=255)
                                                                                                            tCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCca                                          <  1:277093/150‑1 (MQ=255)
                                                                                                                        aCAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTcc                              <  2:361363/150‑1 (MQ=255)
                                                                                                                          aGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGTTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTg                            <  2:1183386/150‑1 (MQ=255)
                                                                                                                          aGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTg                            >  2:1784005/1‑150 (MQ=255)
                                                                                                                           gggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCcaccg                                       <  1:2532561/138‑1 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAggccgg                                                                                                                                     >  1:1587727/1‑43 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAggccgg                                                                                                                                     <  2:1587727/43‑1 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcg                                                                                      <  1:1036595/90‑1 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCa                                                                              >  2:302357/1‑98 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCa                                                                              <  1:302357/98‑1 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTAc                                                                      >  2:3011299/1‑106 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCca                                          <  1:3025774/134‑1 (MQ=255)
                                                                                                                            ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGgc                          >  1:1251224/1‑150 (MQ=255)
                                                                                                                             gttaaaTCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGgcg                         >  2:2830070/4‑150 (MQ=255)
                                                                                                                             gTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGgcg                         >  2:2414251/1‑150 (MQ=255)
                                                                                                                              tGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGgcgc                        <  2:2814229/150‑1 (MQ=255)
                                                                                                                               gAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCt                       >  2:1432285/1‑150 (MQ=255)
                                                                                                                                      gcgTAGGAGCGGGTTCACCGGCGAAGAGTCCGGCCCAGGTCCCCACAAGGCTACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTc                <  1:156012/150‑1 (MQ=255)
                                                                                                                                        ctcttcgcgggtaAacccgcgaagaggccgttgcagttggatcagcgctggcccagcaccggggtattcacttgcacatcggcattctgcgcacggtggcgcagcagggggtccatggacgcaatggccatcatcgcctcggcaatcggc              <  1:2504456‑M2/144‑137 (MQ=255)
                                                                                                                                         tAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGac             >  2:1090403/1‑150 (MQ=255)
                                                                                                                                         aaGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGac             <  2:2949237/149‑1 (MQ=255)
                                                                                                                                                 ggTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTggg     <  2:3062123/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTT  >  NC_002947/2055946‑2056243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.