New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5460828123 (1.070)10 (0.090) 10/230 NT 7.6% intergenic (+161/‑56) holA/PP_4797 DNA polymerase III subunit delta/hypothetical protein
?NC_002947 = 5460836 127 (1.180)intergenic (+169/‑48) holA/PP_4797 DNA polymerase III subunit delta/hypothetical protein

Only 100 of 170 total aligned reads displayed.

GGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACAAGGGCAAAGGC  >  NC_002947/5460688‑5460985
                                                                                                                                                    |                                                                                                                                                     
ggTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACCCAATCAATTGGCCCCCACCCTTCGg                                                                                                                                                      >  1:1494306‑M2/1‑149 (MQ=255)
ggTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGg                                                                                                                                                      >  2:625948‑M2/1‑149 (MQ=255)
 gTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGgg                                                                                                                                                     <  2:2838187‑M2/150‑3 (MQ=255)
     aCCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGgggggc                                                                                                                                                 >  2:1017068‑M2/1‑144 (MQ=255)
     aCCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGgggggc                                                                                                                                                 >  1:2838187‑M2/1‑144 (MQ=255)
       ccGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACTTCTTCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCt                                                                                                                                               >  1:2340673/1‑150 (MQ=255)
       ccGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCt                                                                                                                                               >  2:1878925/1‑150 (MQ=255)
       ccGCGAAGAGACCGGACCTGCTAATCAATCCCCACCCACCAGTCACAGTTGCCGACCCCACCGTATTCGCGGGTAGACCCGCTCCTACACATAGGCACCCGCGCCCCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCt                                                                                                                                               >  2:831170/1‑150 (MQ=255)
        cgcgAAGAGGCCGGACCTGCTAATCAATCTCCCCCCACCGTGCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTa                                                                                                                                              <  1:30358/150‑1 (MQ=255)
        cgcgAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTa                                                                                                                                              <  2:1444723/150‑1 (MQ=255)
                   cGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGgg                                                                                                                                                     >  1:1819448‑M2/1‑130 (MQ=255)
                     gACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGaa                                                                                                                                 <  2:1126774/150‑1 (MQ=255)
                       ccTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCC‑CGAAGGGtgggggccaattgattgtgtatatg                                                                                                                              >  1:454791‑M2/1‑125 (MQ=255)
                        cTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACt                                                                                                                              >  1:1626864/1‑150 (MQ=255)
                        cTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGAACATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACt                                                                                                                              >  1:2985772/1‑150 (MQ=255)
                          gCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGgggggccaatt                                                                                                                                            <  1:604863‑M2/134‑12 (MQ=255)
                          gCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCa                                                                                                                            >  1:74840/1‑150 (MQ=255)
                          gCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCa                                                                                                                            >  1:1919371/1‑150 (MQ=255)
                           cTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCAc                                                                                                                           <  2:1919371/150‑1 (MQ=255)
                            tAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCAcc                                                                                                                          <  1:2266062/150‑1 (MQ=255)
                            tAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCAcc                                                                                                                          >  2:1548702/1‑150 (MQ=255)
                            tAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCAc                                                                                                                           >  1:327844/1‑149 (MQ=255)
                            tAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCAc                                                                                                                           <  2:327844/149‑1 (MQ=255)
                             aatcaatcTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCAccc                                                                                                                         >  1:365125/1‑150 (MQ=255)
                             aatcaatcTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACAACAAGAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCAccc                                                                                                                         >  1:967507/1‑150 (MQ=255)
                             aatcaatcTCCACCCACCGTTCACCGGTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCAccc                                                                                                                         >  2:1580249/1‑150 (MQ=255)
                               tcaatcTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCaa                                                                                                                       >  2:1215841/1‑150 (MQ=255)
                                 aatcTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGgg                                                                                                                                                     >  1:2748185‑M2/1‑116 (MQ=255)
                                 aatcTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAAcc                                                                                                                     >  2:139726/1‑150 (MQ=255)
                                    ctcCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGcc                                                                                                                                     <  2:2744904/131‑1 (MQ=255)
                                    ctcCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGcc                                                                                                                                     >  1:2744904/1‑131 (MQ=255)
                                    ctcCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCgg                                                                                                                  <  2:2437073/150‑1 (MQ=255)
                                       cacccaccGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGaa                                                                                                               >  1:1428159/1‑150 (MQ=255)
                                         cccaccGCTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGc                                                                                                             <  1:41669/150‑1 (MQ=255)
                                          ccaccGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGcc                                                                                                            >  2:1097208/1‑150 (MQ=255)
                                                  caccgttGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGa                                                                                                    <  1:1878925/150‑1 (MQ=255)
                                                   accgttGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCCTCCGGGGTCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAg                                                                                                   <  1:2381250/150‑1 (MQ=255)
                                                         gccgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCaaaaa                                                                                             <  2:365125/150‑1 (MQ=255)
                                                            gccgccACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGcc                                                                                          >  2:1391114/1‑150 (MQ=255)
                                                                 cACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGaaaa                                                                                     >  2:1179854/1‑150 (MQ=255)
                                                                  aCCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGaaaaa                                                                                    <  1:1198700/150‑1 (MQ=255)
                                                                   ccGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAg                                                                                   >  1:667491/1‑150 (MQ=255)
                                                                   ccGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAg                                                                                   >  1:2610489/1‑150 (MQ=255)
                                                                           gcgGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGccc                                                                                                           >  2:3009772/1‑118 (MQ=255)
                                                                           gcgGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGccc                                                                                                           <  1:3009772/118‑1 (MQ=255)
                                                                           gcgGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGccc                                                                           >  1:1203070/1‑150 (MQ=255)
                                                                                tAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCcaaca                                                                      >  1:154861/1‑150 (MQ=255)
                                                                                  aaCCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAg                                                                    <  1:1391114/150‑1 (MQ=255)
                                                                                    cccGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGCCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGc                                                                  >  2:1259140/1‑150 (MQ=255)
                                                                                    cccGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGACCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGc                                                                  >  2:2280915/1‑150 (MQ=255)
                                                                                     ccGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCCCAGTGAGCAAAAAGCCGAAAAAGCACGGccc                                                                           >  1:1696199/1‑140 (MQ=255)
                                                                                     ccGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGccc                                                                           <  2:1696199/140‑1 (MQ=255)
                                                                                         tCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGt                                                             <  2:2610489/150‑1 (MQ=255)
                                                                                           cTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCa                                                                                                                            >  1:765837/1‑85 (MQ=255)
                                                                                           cTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCa                                                                                                                            <  2:765837/85‑1 (MQ=255)
                                                                                           cTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCACCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTcc                                                           >  2:564299/1‑150 (MQ=255)
                                                                                               acaTAGGCACCAGCGACTCGACCATCTCCACCATCACATGGCCGACGGCTTTCGGGGGGCCGACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAACAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCg                                                       <  2:967507/150‑1 (MQ=255)
                                                                                                 aTAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAAAAAGGCAAAGTCCATCGtt                                                     >  1:1125404/1‑150 (MQ=255)
                                                                                                  tAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTg                                                    <  2:868273/150‑1 (MQ=255)
                                                                                                    ggCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCa                                                          >  2:671178/1‑142 (MQ=255)
                                                                                                     gCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAg                                                                                                   >  2:1782634/1‑100 (MQ=255)
                                                                                                       aCCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAg                                               >  1:2556841/1‑150 (MQ=255)
                                                                                                        ccAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGc                                                                                           >  1:1041681/1‑105 (MQ=255)
                                                                                                        ccAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGc                                                                                           <  2:1041681/105‑1 (MQ=255)
                                                                                                        ccAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGc                                              <  2:74840/150‑1 (MQ=255)
                                                                                                         cAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTgc                                                                                                                                        >  2:2531602/1‑59 (MQ=255)
                                                                                                         cAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGcc                                             <  1:1580249/150‑1 (MQ=255)
                                                                                                                tCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTc                                      >  1:256546/1‑150 (MQ=255)
                                                                                                                tCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTc                                      >  1:2685978/1‑150 (MQ=255)
                                                                                                                    ccATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCt                                  >  1:174821/1‑150 (MQ=255)
                                                                                                                    ccATATACACAATCAAGTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCt                                  >  2:277072/1‑150 (MQ=255)
                                                                                                                     cATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTc                                      <  2:304676/145‑1 (MQ=255)
                                                                                                                        ataCACAATCAATTGGCCCCCACCCTTCGgggggccaattgattgtgtatatggtcgaggcgctggtgc                                                                                                               >  2:204841‑M2/1‑29 (MQ=255)
                                                                                                                          acacAATCAATTGGCCCCCACCCTTCGgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtgtaggagcgggtttacccgcgaatacggtggcggcggcaacggtgaacggtgggtggagattgattagcaggtccgg                            >  2:454791‑M2/1‑27 (MQ=255)
                                                                                                                          acacAATCAATTGGCCCCCACCCTTCGGTGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTgccgcc                            >  2:1860451/1‑150 (MQ=255)
                                                                                                                           cacaATCAATTGGCCCCCACCCTTCGgggggccgattgattgtgtatatggtcgaggcgctggtgcctatgtgtaggagcgggtttacccgcgaatacggtggcggcggcaacgg                                                              <  1:2950131‑M2/115‑90 (MQ=255)
                                                                                                                           cacaATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCa                           <  1:2956097/150‑1 (MQ=255)
                                                                                                                            acaATCAATTGGCCCCCACCCTTCGGGGGGCCTGCAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAg                          >  2:2373609/1‑150 (MQ=255)
                                                                                                                            acaATCAATTGGCCCCCACCCTTCGGGGGCCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAg                          <  1:1259140/150‑1 (MQ=255)
                                                                                                                              aatcaatTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGa                        >  1:2430972/1‑150 (MQ=255)
                                                                                                                               atcaatTGGCCCCCACCCTTCGgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtgtaggagcgggtttacccgcgaatacggtggcggcggcaacggtgaacggtgggtggagattgattagcaggtccggcctct                       <  1:2673391‑M2/150‑129 (MQ=255)
                                                                                                                               atcaatTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGaa                       <  2:174821/150‑1 (MQ=255)
                                                                                                                                  aatTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGaacaa                    >  1:2291492/1‑150 (MQ=255)
                                                                                                                                  aatTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGaacaa                    <  2:667491/150‑1 (MQ=255)
                                                                                                                                   atTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAg                                                                                   >  1:888517/1‑86 (MQ=255)
                                                                                                                                    ttGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGtt                                       <  2:478988/129‑1 (MQ=255)
                                                                                                                                    ttGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGtt                                       >  1:478988/1‑129 (MQ=255)
                                                                                                                                       gCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAg                                                                    <  2:2726589/97‑1 (MQ=255)
                                                                                                                                          cccACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACaa            <  2:288428/150‑1 (MQ=255)
                                                                                                                                          cccACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACCGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACaa            <  1:1992815/150‑1 (MQ=255)
                                                                                                                                           ccACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACAAg           <  2:2291492/150‑1 (MQ=255)
                                                                                                                                           ccACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACAAg           <  1:1774034/150‑1 (MQ=255)
                                                                                                                                           ccACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACAAg           >  1:573448/1‑150 (MQ=255)
                                                                                                                                            cACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGc                                   <  1:1084713/125‑1 (MQ=255)
                                                                                                                                            cACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGc                                   >  2:1084713/1‑125 (MQ=255)
                                                                                                                                            cACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACAAgg          <  2:1229161/150‑1 (MQ=255)
                                                                                                                                             aCCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAg                          <  2:1315703/133‑1 (MQ=255)
                                                                                                                                                cTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACAAGGGCaa      >  1:1344644/1‑150 (MQ=255)
                                                                                                                                                 ttCGgggggccaattgattgtgtatatggtcgaggcgctggtgcctatgtgtaggagcgggtttacccgcgaatacggtggcggcggcaacggtgaacggtgggtggagattgattagcaggtccggcctcttcgcgggtaaacccgctc     >  2:2673391‑M2/1‑4 (MQ=255)
                                                                                                                                                 ttCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACAAGGGCaaa     <  2:1626864/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GGTTTACCCGCGAAGAGGCCGGACCTGCTAATCAATCTCCACCCACCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACATAGGCACCAGCGCCTCGACCATATACACAATCAATTGGCCCCCACCCTTCGGGGGGCCTACAGTGCGCCCGAAACTCACCCAACCCGGGAAGCCCACCATGAGCAAAAAGCCGAAAAAGCACGGCCCCAACAAGGCCAAGTCCATCGTTGCCCAGCCACTGTTCCGCTGCCGCCAGGAACAACCGAACAAGGGCAAAGGC  >  NC_002947/5460688‑5460985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.