| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 6,098,944 | (CTTCAG)2→1 | coding (196‑201/867 nt) | PP_5350 ← | RpiR family transcriptional regulator |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 6098935 | 6098940 | 6 | 27 [0] | [0] 29 | PP_5350 | RpiR family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6098941 = | 0 (0.000) | 25 (0.570) | 23/256 | 1.1 | 100% | coding (204/867 nt) | PP_5350 | RpiR family transcriptional regulator |
| ? | NC_002947 | = 6098934 | 0 (0.000) | coding (211/867 nt) | PP_5350 | RpiR family transcriptional regulator | |||||
CGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCACGTGGTCGGCCACTTTCAG > NC_002947/6098800‑6099090 | cgcctgcggatcaaggtgctcgcgcacttccatcagggtgtgcagggtggtgtcgaagatcttcaggctgtagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAg > 1:1042981‑M1/142‑150 (MQ=255) gtgctcgcgcacttccatcagggtgtgcagggtggtgtcgaagatcttcaggctgtagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGa > 1:677779‑M1/127‑150 (MQ=255) gtgctcgcgcacttccatcagggtgtgcagggtggtgtcgaagatcttcaggctgtagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGa > 1:872657‑M1/127‑150 (MQ=255) catcagggtgtgcagggtggtgtcgaagatcttcaggctgtagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCg > 1:565206‑M1/112‑150 (MQ=255) gggtgtgcagggtggtgtcgaagatcttcaggctgtagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGagcagc < 1:464686‑M1/29‑1 (MQ=255) gggtgtgcagggtggtgtcgaagatcttcaggctgtagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGagcagc > 2:464686‑M1/107‑135 (MQ=255) cagggtggtgtcgaagatcttcaggctgtagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCACCAGCAGCCAATGGCCCGGCAGAAACGCAc > 1:765842‑M1/100‑150 (MQ=255) gtggtgtcgaagatcttcaggctgtagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATg > 2:310207‑M1/96‑150 (MQ=255) tagtcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCtg < 2:1145351‑M1/79‑1 (MQ=255) tcggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTgc > 2:366223‑M1/69‑150 (MQ=255) ggcgaccgaatcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTgcgc < 1:129250‑M1/84‑1 (MQ=255) atcgtcttcgtggatggcgaactgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGc > 1:920139‑M1/58‑150 (MQ=255) actgaccgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACgg < 1:491121‑M1/113‑1 (MQ=255) acagaagctggcccaaacagccaggctttgcgcCAGCTTCAGGTCCTGGAGTCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGc < 2:601852‑M1/117‑1 (MQ=255) cgaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCg < 1:707007‑M1/119‑1 (MQ=255) gaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCgg < 2:703693‑M1/120‑1 (MQ=255) gaagctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCgg > 2:707007‑M1/31‑150 (MQ=255) ctggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCg < 2:285859‑M1/124‑1 (MQ=255) tggccccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGa < 2:727796‑M1/125‑1 (MQ=255) gccccggcagccaggctttgcgcCAGCTTCTGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAGTCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGagc < 2:665358‑M1/127‑1 (MQ=255) ccggcagccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGagcagc < 1:885261‑M1/130‑1 (MQ=255) gccaggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCACGTgg > 2:491121‑M1/15‑150 (MQ=255) caggctttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTAGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCACGTGGTc < 2:1053297‑M1/138‑1 (MQ=255) tttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCACGTGGTCGGCCa < 1:714211‑M1/143‑1 (MQ=255) tttgcgcCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCACGTGGTCGGCCa < 1:307983‑M1/143‑1 (MQ=255) cCAGCTTCAGTGCCCGGAAGCTCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCACGTGGTCGGCCACTTTCa > 1:233791‑M1/2‑150 (MQ=255) CAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCAc < 2:114296‑M1/132‑1 (MQ=255) CAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCAc > 1:114296‑M1/1‑132 (MQ=255) CAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCACGTGGTCGGCCACTTTCAg < 2:363315‑M1/150‑1 (MQ=255) | CGGATCAAGGTGCTCGCGCACTTCCATCAGGGTGTGCAGGGTGGTGTCGAAGATCTTCAGGCTGTAGTCGGCGACCGAATCGTCTTCGTGGATGGCGAACTGACCGAAGCTGGCCCCGGCAGCCAGGCTTTGCGCCAGCTTCAGCTTCAGGTCCTGGAAGCCCGAGCAGCCAATGGCCCGGCAGAAACGCACGATGGTCGGCTCACTGATACCCACGCTGTGCGCCAAATCGGCCATGGAGCTGTGCATGACGGCAGCCGGGTCGAGCAGCACGTGGTCGGCCACTTTCAG > NC_002947/6098800‑6099090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |