| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 423331 = | 72 (1.200) | 4 (0.070) | 4/230 | NT | 5.6% | coding (620/2787 nt) | PP_0348 | hypothetical protein |
| ? | NC_002947 | 423368 = | 66 (1.150) | coding (583/2787 nt) | PP_0348 | hypothetical protein | |||||
AGCCTGTCACAAGGCATCGAGGCTTTCGACTCACTGGGCGCACTGCACCAGGAGCTTTGCGAACGCCTGGAAGACCCACTCCAGAGCAGACCGCTGCTGCATCTGTACACTGACACGCAGGCGGACCGCGCTCGCCGGTCAAAGCGTCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/423482‑423331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAG > NC_002947/423368‑423514 AGCCTGTCACAAGGCATCGAGGCTTTCGACTCACTGGGCGCACTGCACCAGGAGCTTTGCGAACGCCTGGAAGACCCACTCCAGAGCAGACCGCTGCTGCATCTGTACACTGACACGCAGGCGGACCGCGCTCGCCGGTCAAAGCGTCTG > 2:584277/1‑150 TGACACGCAGGCGGACCGCGCTCGCCGGTCAAAGCGTCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTG > 2:645212/1‑76 TGACACGCAGGCGGACCGCGCTCGCCGGTCAAAGCGTCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTATG < 1:645212/76‑1 ACGCAGGCGGACCGCGCTCTCCGGTCAAAGCGTCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTC < 1:604327/93‑1 ACGCAGGCGGACCGCGCTCTCCGGTCAAAGCGTCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTC > 2:604327/1‑93 GCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAG < 2:1394841/150‑1 AGCCTGTCACAAGGCATCGAGGCTTTCGACTCACTGGGCGCACTGCACCAGGAGCTTTGCGAACGCCTGGAAGACCCACTCCAGAGCAGACCGCTGCTGCATCTGTACACTGACACGCAGGCGGACCGCGCTCGCCGGTCAAAGCGTCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/423482‑423331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAG > NC_002947/423368‑423514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |