New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 423331 =72 (1.200)4 (0.070) 4/230 NT 5.6% coding (620/2787 nt) PP_0348 hypothetical protein
?NC_002947 423368 = 66 (1.150)coding (583/2787 nt) PP_0348 hypothetical protein

GGTCGGGTGAGGCGTTGCTCCACAAGCCGGTGTCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAG  >  NC_002947/423221‑423514
                                                                                                                                                   |                                                                                                                                                  
ggTCGGGTGAGGCGTTGCTCCCCAAGCAGGTGTCCCTCAAGCGTTGGCGTTGGGCTTCTATCTCACTGTCGGTCCGGGCCTCCAGCAGGTTCTCGGCGTACCAGTCCTAGGGCAGACACTGTGACCGGCGAGCGCGGTGCGCCTGCgtgt                                                                                                                                                  >  1:90046/1‑150 (MQ=255)
ggTCGGGTGAGGCGTTGCTCCACAAGCCGGTGTCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCgtgt                                                                                                                                                  <  1:32365/150‑1 (MQ=255)
ggTCGGGTGAGGCGTTGCTCCACAAGCCGGTGTCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCgtgt                                                                                                                                                  <  1:1632409/150‑1 (MQ=255)
             gTTGCTCCACAAGCCGGTGTCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATg                                                                                                                                     >  2:814132/1‑150 (MQ=255)
                  tCCACAAGCCGGTGTCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTAc                                                                                                                                          >  2:17802/1‑140 (MQ=255)
                  tCCACAAGCCGGTGTCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTAc                                                                                                                                          <  1:17802/140‑1 (MQ=255)
                         gCCGGTGTCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCt                                                                                                                         >  2:434415/1‑150 (MQ=255)
                                tCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTgg                                                                                                                  >  2:282189/1‑150 (MQ=255)
                                 cACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTg                                                                                                                   >  1:718063/1‑148 (MQ=255)
                                 cACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTg                                                                                                                   <  2:718063/148‑1 (MQ=255)
                                   cTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTggcgg                                                                                                               <  1:1291649/150‑4 (MQ=255)
                                   cTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTCCGTGTAAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGt                                                                                                               <  1:1270159/150‑1 (MQ=255)
                                     ccaGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGCCCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTgg                                                                                                             <  2:90046/148‑1 (MQ=255)
                                     cAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTgg                                                                                                             <  2:1261272/150‑1 (MQ=255)
                                     cAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTgg                                                                                                             <  1:227142/150‑1 (MQ=255)
                                      aaGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTgg                                                                                                             <  1:555395/149‑1 (MQ=255)
                                      aaGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTgg                                                                                                             >  2:555395/1‑149 (MQ=255)
                                      aaGCGTTGGCGTTGGGCTTCTATCGCACTGTCGAGCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTggg                                                                                                            >  2:72915/1‑150 (MQ=255)
                                      aaGCGTTGGCGGTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTggg                                                                                                            >  2:407885/1‑150 (MQ=255)
                                       aGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGt                                                                                                           <  1:1355742/150‑1 (MQ=255)
                                          gttggcgttggGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCtt                                                                                                        <  1:1225074/150‑1 (MQ=255)
                                          gttggcgttggGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCtt                                                                                                        >  2:1225074/1‑150 (MQ=255)
                                           ttggcgttggGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTc                                                                                                       <  1:814132/150‑1 (MQ=255)
                                           atctcgttggGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCATGGTTCTGCTCTGGAGTGGGTCTTc                                                                                                       <  1:1042032/146‑1 (MQ=255)
                                              gcgttggGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAg                                                                                                    <  2:1284393/150‑1 (MQ=255)
                                              gcgttggGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAg                                                                                                    <  2:1444343/150‑1 (MQ=255)
                                                gttggGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCGGCCCGTGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAgat                                                                                                  >  2:1042032/1‑148 (MQ=255)
                                                       gaacgcctggaagacccactccagagcagaccgctgctgcatctgtacactgacaCGCAGACGCTTTGACCGGAGAGCGCGGTCCGCCTGCgt                                                                                                                                                    >  2:604327‑M1/56‑93 (MQ=255)
                                                       gaacgcctggaagacccactccagagcagaccgctgctgcatctgtacactgacaCGCAGACGCTTTGACCGGAGAGCGCGGTCCGCCTGCgt                                                                                                                                                    <  1:604327‑M1/38‑1 (MQ=255)
                                                           aTCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGc                                                                                       >  2:1047865/1‑150 (MQ=255)
                                                                  tGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGc                                                                                                  <  1:1513154/132‑1 (MQ=255)
                                                                  tGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGc                                                                                                  >  2:1513154/1‑132 (MQ=255)
                                                                      gATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAg                                                                            >  1:369643/1‑150 (MQ=255)
                                                                       aTCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTgg                                                                                                             <  2:1342181/116‑1 (MQ=255)
                                                                       aTCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTgg                                                                                                             >  1:1342181/1‑116 (MQ=255)
                                                                       aTCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGt                                                                           <  2:369643/150‑1 (MQ=255)
                                                                       aTCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGt                                                                           <  1:1202708/150‑1 (MQ=255)
                                                                           gggCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTgcgc                                                                       >  1:1498444/1‑150 (MQ=255)
                                                                            catagcagaccgctgctgcatctgtacactgacaCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCa                                                                                                                                                <  1:645212‑M1/42‑1 (MQ=255)
                                                                            cagagcagaccgctgctgcatctgtacactgacaCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCa                                                                                                                                                >  2:645212‑M1/35‑76 (MQ=255)
                                                                              ccTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCCCTCGCAAAGCTCCTGGTGCAGTGCGCCCa                                                                    >  1:21977/1‑150 (MQ=255)
                                                                               cTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTggg                                                                                                            >  2:37812/1‑109 (MQ=255)
                                                                               cTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTggg                                                                                                            <  1:37812/109‑1 (MQ=255)
                                                                               cTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAg                                                                   >  2:635227/1‑150 (MQ=255)
                                                                                tCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGt                                                                  <  1:407885/150‑1 (MQ=255)
                                                                                tCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGt                                                                  <  2:21977/150‑1 (MQ=255)
                                                                                  cagcagGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGct                                                                                                                      >  1:1163644/1‑96 (MQ=255)
                                                                                  cagcagGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGct                                                                                                                      <  2:1163644/96‑1 (MQ=255)
                                                                                   agcagGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAg                                                               >  2:603042/1‑150 (MQ=255)
                                                                                     cagGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTc                                                             <  2:241133/150‑1 (MQ=255)
                                                                                        gTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTg                                                                                                                   >  2:139117/1‑93 (MQ=255)
                                                                                        gTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTg                                                                                                                   <  1:139117/93‑1 (MQ=255)
                                                                                          tATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCCGTGCGCCCACTGCGCCGCAAg                                                        >  2:505503/1‑150 (MQ=255)
                                                                                             cGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCt                                                     <  1:79515/150‑1 (MQ=255)
                                                                                               gCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCgt                                                                                                                                                    <  1:902483/53‑1 (MQ=255)
                                                                                               gCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCgt                                                                                                                                                    >  2:902483/1‑53 (MQ=255)
                                                                                                      aGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCTAGTGAGTCGAAAGCCTCGATGCCt                                             <  2:1647960/149‑1 (MQ=255)
                                                                                                      aGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCTAGTGAGTCGAAAGCCTCGATGCCt                                             >  1:1647960/1‑149 (MQ=255)
                                                                                                      aGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCtt                                            >  1:584277/1‑150 (MQ=255)
                                                                                                      aGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCtt                                            >  1:298239/1‑150 (MQ=255)
                                                                                                        tCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTtgt                                          >  2:404674/1‑150 (MQ=255)
                                                                                                         tgacacgcaggcggaccgcgctcgccggtcaaagcgtctgcgTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTg                                                                                                                   >  2:645212‑M2/43‑76 (MQ=255)
                                                                                                         tgacacgcaggcggaccgcgctcgccggtcaaagcgtctgcgTGTCAGTGTACAGATGCAGCAGCGGTCTGCTATg                                                                                                                   <  1:645212‑M2/34‑1 (MQ=255)
                                                                                                          aTAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAACTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGa                                        >  2:218773/1‑150 (MQ=255)
                                                                                                          aTAGCGCAGACGCCTTGAAAGCCGAGAGCAGTCCTCATGCGCGGGAGTTGACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTGGAAAGCCTCGATGCCTTGTGa                                        >  2:677198/1‑150 (MQ=255)
                                                                                                             acgcaggcggaccgcgctctccggtcaaagcgtctgcgTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTc                                                                                              <  1:604327‑M2/55‑1 (MQ=255)
                                                                                                             acgcaggcggaccgcgctctccggtcaaagcgtctgcgTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTc                                                                                              >  2:604327‑M2/39‑93 (MQ=255)
                                                                                                                CAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCt                                  >  2:584277‑M1/1‑150 (MQ=255)
                                                                                                                   aCGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGca                               <  1:404674/150‑1 (MQ=255)
                                                                                                                     gCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGa                                        <  2:87768/139‑1 (MQ=255)
                                                                                                                     gCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGa                                        >  1:87768/1‑139 (MQ=255)
                                                                                                                       tttGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTg                                                                                                              <  1:924070/67‑1 (MQ=255)
                                                                                                                       tttGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTg                                                                                                              >  2:924070/1‑67 (MQ=255)
                                                                                                                       tttGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGc                           >  2:956497/1‑150 (MQ=255)
                                                                                                                         tGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCAcaacaa                         <  2:1161952/150‑1 (MQ=255)
                                                                                                                             cGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTgcgc                                                                       >  1:161364/1‑100 (MQ=255)
                                                                                                                             cGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTgcgc                                                                       <  2:161364/100‑1 (MQ=255)
                                                                                                                             cGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCa                     >  1:501680/1‑150 (MQ=255)
                                                                                                                                     gcgGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGc             <  1:1418345/150‑1 (MQ=255)
                                                                                                                                     gcgGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGc             <  1:9150/150‑1 (MQ=255)
                                                                                                                                           cGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATc       >  1:1394841/1‑150 (MQ=255)
                                                                                                                                            gCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCg            <  1:1240137/144‑1 (MQ=255)
                                                                                                                                            gCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCg            >  2:1240137/1‑144 (MQ=255)
                                                                                                                                                gcgTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAg  <  2:1394841‑M2/147‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GGTCGGGTGAGGCGTTGCTCCACAAGCCGGTGTCACTCAAGCGTTGGCGTTGGGCTTCTATCGCACTGTCGATCTGGGCCTCCAGCAGGTTATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAG  >  NC_002947/423221‑423514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.