| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 830700 | 60 (1.000) | 5 (0.090) | 5/224 | NT | 8.1% | coding (1072/1098 nt) | PP_0714 | PerM family transporter |
| ? | NC_002947 | = 830705 | 57 (1.020) | coding (1077/1098 nt) | PP_0714 | PerM family transporter | |||||
GGGCGCGGGGTTGATGTACCGATGCCGGTGGTACTGATCGGGGCATTAGGTGGCATGGTGGTCAAAGGCATCATCGGCTTGTTTATCGGCCCGGTAATCCTCGGCGTGACGTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGGTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/830550‑830700‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccggTTGC‑TCCGGCACCTGCAGCGCAACCCATTGCCAGAACAGCACGTACGTCACGCCGAGGATTACCGGGCCGATAAACAAGCCGATGATGCCTTTGACCACCATGCCACCTAATGCCCCGATCAGTACCACCGGCATCGGTACATCA < NC_002947/830705‑830561 GGGCGCGGGGTTGATGTACCGATGCCGGTGGTACTGATCGGGGCATTAGGTGGCATGGTGGTCAAAGGCATCATCGGCTTGTTTATCGGCCCGGTAATCCTCGGCGTGACGTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGGTGCCG < 1:1237084/150‑1 ATGTACCGATGCCGGTGGTACTGATCGGGGCATTAGGTGGCATGGTGGTCAAAGGCATCATCGGCTTGTTTATCGGCCCGGTAATCCTAGGCGTGACGTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGGTGCCGGTTGC‑TCCGGCAC < 2:1368569/150‑1 GGGGCATTAGGTGGCATGGTGGTCAAAGGCATCATCGGCTTGTTTATCGGCCCGGTAATCCTCGGCGTGACGTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGG < 1:370274/106‑1 GGGGCATTAGGTGGCATGGTGGTCAAAGGCATCATCGGCTTGTTTATCGGCCCGGTAATCCTCGGCGTGACGTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGG > 2:370274/1‑106 GCTTGTTTATCGGCCCGGTAATCCTCGGCGTGACGTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGGTGCCGGTTGC‑TCCGGCACCTGCAGC > 2:1527230/1‑94 GTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGGTGCCGGTTGC‑TCCGGCACCTGCAG > 1:657881/1‑59 GTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGGTGCCGGTTGC‑TCCGGCACCTGCAG < 2:657881/59‑1 GCTGCAGGTGCCGG‑AGCAACCGGCACCTGCAGCGCAACCCATTGCCAGAACAGCACGTACGTCACGCCGAGGATTACCGGGCCGATAAACAAGC > 1:1527230/1‑94 GGTGCCGGTTGC‑CCCGGAACCTGCAAAGCCTGGCACTGGCAGAACACCAGGTACGTCACGCCGAGGATTACCGGGCCGATAAACAAGCCGATGATGCCTTTGACCACCATGCCACCTAATGCCCCGATCAGTACCACCGGCATCGGTACA < 2:429188/150‑1 GCCGGTTGC‑TCCGGCACCTGCAGCGCAACCCATTGCCAGAACAGCACGTACGTCACGCCGAGGATTACCGGGCCGATAAACAAGCCGATGATGCCTTTGACCACCATGCCACCTAATGCCCCGATCAGTACCACCGGCATCGGTACATCA > 1:1079782/1‑150 CCGGTTGC‑TCCGGCACCTGCAGCGCAACCCATTGCCAGAACAGCACGTACGTCACGCCGAGGATTACCGGGCCGATAAACAAGCCGATGATGCCTTTGACCACCATGCCACCTAATGCCCCGATCAGTACCACCG > 1:1474962/1‑135 CCGGTTGC‑TCCGGCACCTGCAGCGCAACCCATTGCCAGAACAGCACGTACGTCACGCCGAGGATTACCGGGCCGATAAACAAGCCGATGATGCCTTTGACCACCATGCCACCTAATGCCCCGATCAGTACCACCG < 2:1474962/135‑1 GGGCGCGGGGTTGATGTACCGATGCCGGTGGTACTGATCGGGGCATTAGGTGGCATGGTGGTCAAAGGCATCATCGGCTTGTTTATCGGCCCGGTAATCCTCGGCGTGACGTACGTGCTGTTCTGGCAATGGGTTGCGCTGCAGGTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/830550‑830700‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccggTTGC‑TCCGGCACCTGCAGCGCAACCCATTGCCAGAACAGCACGTACGTCACGCCGAGGATTACCGGGCCGATAAACAAGCCGATGATGCCTTTGACCACCATGCCACCTAATGCCCCGATCAGTACCACCGGCATCGGTACATCA < NC_002947/830705‑830561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |