| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 831493 = | 73 (1.220) | 4 (0.070) | 4/230 | NT | 5.8% | coding (764/1515 nt) | PP_0715 | outer membrane efflux protein |
| ? | NC_002947 | 831529 = | 61 (1.060) | coding (800/1515 nt) | PP_0715 | outer membrane efflux protein | |||||
CAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGGCGCTGCAGCAGGCTGGCAGGTACATCCTGCAACACTGCCCGGTTGGGCAAGGGCAGTTGGCCATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/831644‑831493‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACA > NC_002947/831529‑831676 CAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGGCGCTGCAGCAGGCTGGCAGGTACATCCTGCAACACTGCCCGGTTGGGCAAGGGCAGTTGGCCATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGG > 1:681138/1‑150CAGCGCCGAATGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGAATCATCAACAAGCCGGCAGTTACATCCTGCAACACTGCCCGGTTGGGCAAGGGCAGTTGGCCATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGG < 1:1427108/150‑1 GCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGGCGCTGCAGCAGGCTGGCAGGTACATCCTGCAACACTGCCCGGTTGGGCAAGGGCAGTTGGCCATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGGGC < 2:1202672/150‑1 CATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCA < 1:391618/76‑1 CATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCA > 2:391618/1‑76 ATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCC < 1:891015/116‑1 ATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCC > 2:891015/1‑116 CGGGCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCC > 2:892443/1‑150 GCATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACA > 1:55212/1‑150 CAGCGCCGACTGCGCCGCCACTGCCTGCTCGGCGGCGCGGATGTCCGGGCGGCGCTGCAGCAGGCTGGCAGGTACATCCTGCAACACTGCCCGGTTGGGCAAGGGCAGTTGGCCATGCCCGGCCTCCAGCTGCGGCAGCGGCCCGGGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/831644‑831493‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcATGGCCAACTGCCCTTGCCCAACCGGGCAGTGTTGCAGGATGTACCTGCCAGCCTGCTGCAGCGCCGCCCGGACATCCGCGCCGCCGAGCAGGCAGTGGCGGCGCAGTCGGCGCTGGTCGGGGTGGCCGAGGCCGATCTTTATCCACA > NC_002947/831529‑831676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |