| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1192305 = | 74 (1.240) | 4 (0.070) | 4/228 | NT | 5.4% | coding (1351/2076 nt) | upxB | phosphatase |
| ? | NC_002947 | 1192344 = | 70 (1.230) | coding (1312/2076 nt) | upxB | phosphatase | |||||
TGTGGGACCCCGCCGACGCCACCCCGGCCGACCGCCTGGCCACCGGCGCCAAGTACCTCGACCAAGGCAAGCTCTACGTGGCCCGCTTCAATGCCGACGGCACCGGTGTATGGCTGCTGCTGGACGTGGCCACCGCCACCACCGCCGGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1192457‑1192305‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcaGCCATACACCGGTGCCGTCGGCATTGAAGCGGGCCACGTAGAGCTTGCCTTGGTCGAGGTACTTGGCGCCGGTGGCCAGGCGGTCGGCCGGGGTGGCGTCGGCGGGGTCCCACACGGCGGTGGACACCCACTTGTACAGGTACTCGTT > NC_002947/1192344‑1192491 TGTGGGACCCCGCCGACGCCACCCCGGCCGACCGCCTGGCCACCGGCGCCAAGTACCTCGACCAAGGCAAGCTCTACGTGGCCCGCTTCAATGCCGACGGCACCGGTGTATGGCTGCTGCTGGACGTGGCCACCGCCACCACCGCCGGCA > 2:443960/1‑150TGTGGGACCCCGCCGACGCCACCCCGGCCGACCGCCTGGCCACCGGCGCCAAGTACCTCGACCAAGGCAAGCTCTACGTGGCCCGCTTCAATGCCGACGGCACCGGAGTATGGCTGCTGCTGGACGTGGCCACCGCCACCACCGCCGGCA < 2:581285/150‑1 GGGACCCCGCCGACGCCACCCCGGCCGACCGCCTGGCCACCGGCGCCCAGTACCTCGACCAAGGCAAGCTCTACGTGGCCCGCTTCAATGCCGACGGCACCGGTGTATGGCTGCTGCTGGACGTGGCCACCGCCACCACCGCCGGCAGCA > 2:1636359/1‑150 TGCTGGACGTGGCCACCGCCACCACCGCCGGCAGCAGCCATACACCGGTGCCGTCGGCATTGAAGCGGGCCACGTAGAGCTTGCCTTGGTCGAGGTACTTGGCGCCGGTGGCCAGGC < 1:747973/117‑1 TGCTGGACGTGGCCACCGCCACCACCGCCGGCAGCAGCCATACACCGGTGCCGTCGGCATTGAAGCGGGCCACGTAGAGCTTGCCTTGGTCGAGGTACTTGGCGCCGGTGGCCAGGC > 2:747973/1‑117 CACCGCCACCACCGCCGGCAGCAGCCATACACCGGTGCCGTCGGCATTGAAGCGGGCCACGTAGAGCTTGCCTTGG > 1:1029099/1‑76 CACCGCCACCACCGCCGGCAGCAGCCATACACCGGTGCCGTCGGCATTGAAGCGGGCCACGTAGAGCTTGCCTTGG < 2:1029099/76‑1 CAGCAGCCATACACCGGTGCCGTCGGCATTGAAGCGGGCCACGTAGAGCTTGCCTTGGTCGAGGTACTTGGCGCCGGTGGCCAGGCGGTCGGCCGGGGTGGCGTCGGCGGGGTCCCACACGGCGGTGGACACCCACTTGTACAGGTACTC < 1:1510086/150‑1 CAGCCATACACCGGTGCCGTCGGCATTGAAGCGGGCCACGTAGAGCTTGCCTTGGTCGAGGTACTTGGCGCCGGTGGCCAGGCGGTCGGCCGGGGTGGCGTCGGCGGGGTCCCACACGGCGGTGGACACCCACTTGTACAGGTACTCGTT < 1:104532/150‑1 TGTGGGACCCCGCCGACGCCACCCCGGCCGACCGCCTGGCCACCGGCGCCAAGTACCTCGACCAAGGCAAGCTCTACGTGGCCCGCTTCAATGCCGACGGCACCGGTGTATGGCTGCTGCTGGACGTGGCCACCGCCACCACCGCCGGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1192457‑1192305‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcaGCCATACACCGGTGCCGTCGGCATTGAAGCGGGCCACGTAGAGCTTGCCTTGGTCGAGGTACTTGGCGCCGGTGGCCAGGCGGTCGGCCGGGGTGGCGTCGGCGGGGTCCCACACGGCGGTGGACACCCACTTGTACAGGTACTCGTT > NC_002947/1192344‑1192491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |