New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1268668	79 (1.320)	4 (0.070)	4/232	NT	5.0%	coding (770/1341 nt)	PP_1109	GntR family transcriptional regulator
	?	NC_002947	= 1268685	75 (1.300)					coding (753/1341 nt)	PP_1109	GntR family transcriptional regulator

GCAGCGAGGCCGACAGGCATTTGGAGAAGCTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1268516‑1268668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaCAACGCCTTCAGCGTCCTGCGCCTGGCGGTGGAGCACGAGTTCTTCGTGGTCGAGGACGACGTTTATGGGGACTTCAGCCCTGCTGTGCGCCAGACCTTTGCCGAGCTGGACAACCTTGACCGGGTTATCTACATCGGCAGCTTCTCC  <  NC_002947/1268685‑1268538                                                                                                                                                                                                                                                                                                               GCAGCGAGGCCGACAGGCATTTGGAGAAGCTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGC                                                                                                                                                         <  2:1215807/150‑1    GCGAGGCCGACAGGCATCTGGAGAAGCTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCA                                                                                                                                                      >  2:145375/1‑150                                                                         AGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCACAACGCCTTCAGCGTCCTGCGC                                                                                                                                >  1:1436070/1‑103                                                                         AGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCACAACGCCTTCAGCGTCCTGCGC                                                                                                                                <  2:1436070/103‑1                                                                                                      CCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCACAACGCCTTCAGCGTCCTGCGCCTGGCGGTGGAGCACGAGTTCTT                                                                                                         >  1:488393/1‑97                                                                                                      CCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCACAACGCCTTCAGCGTCCTGCGCCTGGCGGTGGAGCACGAGTTCTT                                                                                                         <  2:488393/97‑1                                                                                                                                                       GCACAACGCCTTCAGCGTCCTGCGCCTGGCGGTGGAGCACGAGTTCTTCGTGGTCGAGGACGACGTTTATGGGGACTTCAGCCCTGCTGTGCGCCAGACCTTTGCCGAGCTGGACAACCTTGACCGGGTTATCTACATCGGCAGCTTCTC   <  1:902125/150‑1                                                                                                                                                       GCACAACGCCTTCAGCGTCCTGCGCCTGGCGGTGGAGCACGAGTTCTTCGTGGTCGAGGACGACGTTTATGGGGACTTCAGCCCTGC                                                                  >  1:253969/1‑87                                                                                                                                                       GCACAACGCCTTCAGCGTCCTGCGCCTGGCGGTGGAGCACGAGTTCTTCGTGGTCGAGGACGACGTTTATGGGGACTTCAGCCCTGC                                                                  <  2:253969/87‑1                                                                                                                                                        CACAACGCCTTCAGCGTCCTGCGCCTGGCGGTGGAGCACGAGTTCTTCGTGGTCGAGGACGACGTTTATGGGGACTTCAGCCCTGCTGTGCGCCAGACCTTTGCCGAGCTGGACAACCTTGACCGGGTTATCTACATCGGCAGCTTCTCC  <  1:772277/150‑1                                                                                                                                                                                                                                                                                                               GCAGCGAGGCCGACAGGCATTTGGAGAAGCTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1268516‑1268668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaCAACGCCTTCAGCGTCCTGCGCCTGGCGGTGGAGCACGAGTTCTTCGTGGTCGAGGACGACGTTTATGGGGACTTCAGCCCTGCTGTGCGCCAGACCTTTGCCGAGCTGGACAACCTTGACCGGGTTATCTACATCGGCAGCTTCTCC  <  NC_002947/1268685‑1268538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.