New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 126866879 (1.320)4 (0.070) 4/232 NT 5.0% coding (770/1341 nt) PP_1109 GntR family transcriptional regulator
?NC_002947 = 1268685 75 (1.300)coding (753/1341 nt) PP_1109 GntR family transcriptional regulator

GGAGAAGCTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTCCGCCGAATGCCGACGACGTGTCCGCCA  >  NC_002947/1268538‑1268829
                                                                                                                                                   |                                                                                                                                                
ggAGAAGCTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGtg                                                                                                                                                <  1:772277‑M2/150‑3 (MQ=255)
 gagaAGCTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGtgc                                                                                                                                               <  1:902125‑M2/150‑4 (MQ=255)
       cTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTg                                                                                                                                         <  2:772277/150‑1 (MQ=255)
        tGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGa                                                                                                                                        <  1:145375/150‑1 (MQ=255)
             aTGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTtg                                                                                                                                   <  1:842995/150‑1 (MQ=255)
                 aGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTtgctgc                                                                                                                               >  1:872221/1‑150 (MQ=255)
                   aTAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCg                                                                                                                             >  2:329116/1‑150 (MQ=255)
                   aTAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCg                                                                                                                             >  2:1628842/1‑150 (MQ=255)
                   aTAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCg                                                                                                                             >  1:1013046/1‑150 (MQ=255)
                   aTAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCg                                                                                                                             <  2:885616/150‑1 (MQ=255)
                      aCCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTc                                                                                                                          <  1:417767/150‑1 (MQ=255)
                       cccGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGACGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCg                                                                                                                         >  2:637081/1‑150 (MQ=255)
                        ccGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTtgct                                                                                                                                 >  2:612089/1‑141 (MQ=255)
                        ccGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTtgct                                                                                                                                 <  1:612089/141‑1 (MQ=255)
                        ccGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCCGTCgg                                                                                                                        >  2:932324/1‑150 (MQ=255)
                        ccGGTCAAGGTCGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTtgctgc                                                                                                                               <  1:1483592/143‑1 (MQ=255)
                        ccGGTCAAGGTCGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTtgctgc                                                                                                                               >  2:1483592/1‑143 (MQ=255)
                         cGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCggg                                                                                                                       <  2:1427265/150‑1 (MQ=255)
                           gTCAAGGTCGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGtt                                                                                                                     <  1:907734/150‑1 (MQ=255)
                            tCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTtg                                                                                                                    <  2:926973/150‑1 (MQ=255)
                                  ttGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAg                                                                                                              <  1:329116/150‑1 (MQ=255)
                                         agccGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGt                                                                                                       >  1:471217/4‑150 (MQ=255)
                                           tCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTg                                                                                                        <  1:561117/147‑1 (MQ=255)
                                           tCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTg                                                                                                        >  2:561117/1‑147 (MQ=255)
                                            cGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGc                                                                                                    <  1:440957/150‑1 (MQ=255)
                                              gCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGtt                                                                                                      >  2:187369/1‑146 (MQ=255)
                                              gCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGtt                                                                                                      <  1:187369/146‑1 (MQ=255)
                                                aaaGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTAGAAACCGGAAAACTCGTGCTCCACCGCCAGTCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGaa                                                                                                >  1:1020784/1‑150 (MQ=255)
                                                    gTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAAc                                                                                            >  1:545411/1‑150 (MQ=255)
                                                             acaGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGAcc                                                                                   >  2:636562/1‑150 (MQ=255)
                                                                gcagGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGtgc                                                                                                                                               <  2:253969‑M2/87‑4 (MQ=255)
                                                                gcagGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGtgc                                                                                                                                               >  1:253969‑M2/1‑84 (MQ=255)
                                                                 cagGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTtgt                                                                               <  1:1629254/150‑1 (MQ=255)
                                                                 cagGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTCGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTtgt                                                                               >  1:1162955/1‑150 (MQ=255)
                                                                  agGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGcc                                                                                         <  2:392481/139‑1 (MQ=255)
                                                                  agGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGcc                                                                                         >  1:392481/1‑139 (MQ=255)
                                                                   gggCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGc                                                                             <  1:636562/150‑1 (MQ=255)
                                                                              cccATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTg                                                                  >  2:1459081/1‑150 (MQ=255)
                                                                              cccATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCAGCCGGGTTGTGGAAGGTGGGGTTGCAGAAAAACGACTTGACCTTGTGCCTGGCCAGGTg                                                                  >  2:576828/1‑150 (MQ=255)
                                                                               ccATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTgg                                                                 >  1:1615582/1‑150 (MQ=255)
                                                                                cATAAACGTCGTCCTCGACCACGAACAACTCGTGCTCCACCGCCAGGCTCAGGACGCTCAAGGCGTTGTGCGGGCTGACGTTGATGCCCGTCGGGTTGTGGACGGGCCTGTTGCAGAAACACGCCTTCACCCTGTGCCTGGCCAGGGGGc                                                                >  2:581406/1‑150 (MQ=255)
                                                                                  tAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCtt                                                              <  1:95275/150‑1 (MQ=255)
                                                                                  tAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCtt                                                              >  2:71516/1‑150 (MQ=255)
                                                                                       gtcgtcCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCa                                                                                                   <  2:1194185/108‑1 (MQ=255)
                                                                                       gtcgtcCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCa                                                                                                   >  1:1194185/1‑108 (MQ=255)
                                                                                       gtcgtcCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTAGCTTATCAt                                                         >  2:752522/1‑150 (MQ=255)
                                                                                        tcgtcCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCAtt                                                        <  2:1013046/150‑1 (MQ=255)
                                                                                             cTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTgg                                                                 >  1:149199/1‑136 (MQ=255)
                                                                                             cTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTgg                                                                 <  2:149199/136‑1 (MQ=255)
                                                                                             cTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATttcttc                                                   <  2:902125/150‑1 (MQ=255)
                                                                                             cTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATttcttc                                                   <  2:150410/150‑1 (MQ=255)
                                                                                               cGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTAGCTTCTCATTTCTTCCa                                                 <  1:752522/150‑1 (MQ=255)
                                                                                               cGACCACGAAGAACTCGTGCTCCACCCCCAGCCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGGAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCa                                                 <  1:752068/150‑1 (MQ=255)
                                                                                                  ccACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGt                                              >  2:1547816/1‑150 (MQ=255)
                                                                                                      gaagaaCTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCAt                                                         <  1:159541/135‑1 (MQ=255)
                                                                                                      gaagaaCTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCAt                                                         >  2:159541/1‑135 (MQ=255)
                                                                                                      gaagaaCTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCgg                                          >  1:978409/1‑150 (MQ=255)
                                                                                                      gaagaaCTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAAAGCCTGGACCTTGTGGCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCgg                                          >  2:1570322/1‑150 (MQ=255)
                                                                                                       aagaaCTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGtgcgcctggcggtggagcacgagttcttcgtggtcgaggacgacgtttatgg                                                                                              <  2:488393‑M2/97‑53 (MQ=255)
                                                                                                       aagaaCTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGtgcgcctggcggtggagcacgagttcttcgtggtcgaggacgacgtttatgg                                                                                              >  1:488393‑M2/1‑45 (MQ=255)
                                                                                                       aagaaCTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGc                                         >  2:1473455/1‑150 (MQ=255)
                                                                                                             tCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGtt                                                                                                      <  2:592036/83‑1 (MQ=255)
                                                                                                             tCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGtt                                                                                                      >  1:592036/1‑83 (MQ=255)
                                                                                                               gTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCa                                                                                                   >  1:1344581/1‑84 (MQ=255)
                                                                                                               gTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCa                                                                                                   <  2:1344581/84‑1 (MQ=255)
                                                                                                                     cACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGc                                         <  1:1100426/136‑1 (MQ=255)
                                                                                                                     cACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGc                                         >  2:1100426/1‑136 (MQ=255)
                                                                                                                     cACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTccg                           >  1:1280249/1‑150 (MQ=255)
                                                                                                                       ccGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTccgcc                         >  1:1409958/1‑150 (MQ=255)
                                                                                                                          ccAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCa                                                                                                   <  2:662820/73‑1 (MQ=255)
                                                                                                                          ccAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCa                                                                                                   >  1:662820/1‑73 (MQ=255)
                                                                                                                          ccAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCa                                                                                                   >  1:664621/1‑73 (MQ=255)
                                                                                                                          ccAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCa                                                                                                   <  2:664621/73‑1 (MQ=255)
                                                                                                                          ccAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGc                                                                                          <  2:937458/82‑1 (MQ=255)
                                                                                                                          ccAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGc                                                                                          >  1:937458/1‑82 (MQ=255)
                                                                                                                          ccAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTCCGCCGaa                      <  1:932324/150‑1 (MQ=255)
                                                                                                                            aGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTCCGCCGAATg                    <  1:1459081/150‑1 (MQ=255)
                                                                                                                              gcgcAGGACGCTGAAGGCGTTGtgcgcctggcggtggagcacgagttcttcgtggtcgaggacgacgtttatggggacttcagccctgctgtgcgccagacct                                                                 <  2:1436070‑M2/103‑82 (MQ=255)
                                                                                                                              gcgcAGGACGCTGAAGGCGTTGtgcgcctggcggtggagcacgagttcttcgtggtcgaggacgacgtttatggggacttcagccctgctgtgcgccagacct                                                                 >  1:1436070‑M2/1‑22 (MQ=255)
                                                                                                                              gcgcAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTCCGCCGAATGcc                  <  1:1628842/150‑1 (MQ=255)
                                                                                                                                    gACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTtgt                                                                                                                   >  2:1480456/1‑47 (MQ=255)
                                                                                                                                    gACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTtgt                                                                                                                   <  1:1480456/47‑1 (MQ=255)
                                                                                                                                        cTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTCCGCCGAATGCCGACGACgtgt        >  1:1227288/1‑150 (MQ=255)
                                                                                                                                              gCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTCCGCCGAATGCCGACGACGTGTCCgcca  <  2:1409958/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
GGAGAAGCTGCCGATGTAGATAACCCGGTCAAGGTTGTCCAGCTCGGCAAAGGTCTGGCGCACAGCAGGGCTGAAGTCCCCATAAACGTCGTCCTCGACCACGAAGAACTCGTGCTCCACCGCCAGGCGCAGGACGCTGAAGGCGTTGTGCGGGCTGATGTTGCTGCCGGTCGGGTTGTGGAAGGTGCTGTTGCAGAAAAACGCCTTGACCTTGTGCCTGGCCAGGTGGCTTCTCATTTCTTCCACGTCCGGCCCGTCCTGGGTCCGCCGAATGCCGACGACGTGTCCGCCA  >  NC_002947/1268538‑1268829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.