| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1511002 = | 71 (1.190) | 8 (0.140) | 7/236 | NT | 10.2% | pseudogene (607/1851 nt) | PP_1325 | putative lipoprotein |
| ? | NC_002947 | 1511025 = | 71 (1.210) | pseudogene (584/1851 nt) | PP_1325 | putative lipoprotein | |||||
CACAGCAGCGCATCCTGCTGGCCCCGCTGCTTGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCTGGCTGGCTGGA‑CCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1511151‑1511002‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATC > NC_002947/1511025‑1511173 CACAGCAGCGCATCCTGCTGGCCCCGCTGCTTGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCTGGCTGGCTGGA‑CCAGCCTGG > 2:1071884/1‑150 GCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCAGGCTGG‑TCCAGCCAGCCAGGGTCTGATCGTTG < 1:337408/100‑1 GCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCAGGCTGG‑TCCAGCCAGCCAGGGTCTGATCGTTG > 2:337408/1‑100 ACCCTGGCTGGCTGGA‑CCAGCCTGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTG > 1:1462738/1‑59 ACCCTGGCTGGCTGGA‑CCAGCCTGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTG < 2:1462738/59‑1 CCTGGCTGGCTGGA‑CCAGCCTGGGTCTGATCGTTGGTTGGCTGCTGCAG < 1:203927/49‑1 CCTGGCTGGCTGGA‑CCAGCCTGGGTCTGATCGTTGGTTGGCTGCTGCAG > 2:203927/1‑49 CCTGGCTGGCTGGA‑CCAGCCAGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGGGGCGACCAAGGCCCAGATGGTGTCATGGTTGGTGCTGGCGGCCTGGCCGGAAAGCAGCAGGGATACCAGGATGCGCTGCTGTG > 1:903483/1‑150 CTGGCTGGCTGGA‑CCAGCCTGGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGC > 1:37321/1‑150 GGGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCAT < 1:673274/150‑1 GGTCTTATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATC < 1:413358/150‑1 GGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATC > 2:1434141/1‑150 CACAGCAGCGCATCCTGCTGGCCCCGCTGCTTGGCGGCCAGGCCGCCAGCACCAACAATGACGCCATCTGGGCCTTGGTCGCCTCGCTGCCTGCAGAGCAACTGCAGCAGCCAACCAACGATCAGACCCTGGCTGGCTGGA‑CCAGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1511151‑1511002‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggGTCTGATCGTTGGTTGGCTGCTGCAGTTGCTCTGCAGGCAGCGAGGCGACCAAGGCCCAGATGGCGTCATTGTTGGTGCTGGCGGCCTGGCCGCCAAGCAGCGGGGCCAGCAGGATGCGCTGCTGTGCGGCAGCCAGGGCCTGGCCATC > NC_002947/1511025‑1511173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |