New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1556514	44 (0.730)	5 (0.090)	5/230	NT	10.5%	coding (376/852 nt)	purU‑II	formyltetrahydrofolate hydrolase
	?	NC_002947	= 1556524	43 (0.750)					coding (386/852 nt)	purU‑II	formyltetrahydrofolate hydrolase

TCCATGACCTGGCGCATTACCGACTCGGCTCAGAAAAAACGCGTGGTATTGATGGCCAGCCGTGAGTCGCACTGCCTGGCAGACTTGCTGCACCGCTGGCACACCGATGAGCTGGACTGCGAGATCCCTTGCGTGATTTCCAACCACAACGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1556361‑1556514 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccATGCTGC‑GCA‑GGTCGTTGTGGTTGGAAATCACGCAAGGGATCTCGCAGTCCAGCTCATCGGTGTGCCAGCGGTGCAGCAAGTCTGCCAGGCAGTGCGACTCACGGCTGGCCATCAATACCACGCGTTTTTTCTGAGCCGAGTCGGTAAT  <  NC_002947/1556524‑1556376                                                                                                                                                                                                                                                                                                                   TCCATGACCTGGCGCATTACCGACTCGGCTCAGAAAAAACGCGTGGTATTGATGGCCAGCCGTGAGTCGCACTGCCTGGCAGACTTGCTGCACCGCTGGCACACCGATGAGCTGGACTGCGAGATCCCTTGCGTGATTTCCAACCACAAC                                                                                                                                                             >  1:416745/1‑150                                                                                       GCTGCACCGCTGGCACACCGATGAGCTGGACTGCGAGATCCCTTGCGTGATTTCCAACCACAACGACCATGCTGC‑GCA‑GGTCGTTGTGG                                                                                                                                  >  1:197324/1‑89                                                                                       GCTGCACCGCTGGCACACCGATGAGCTGGACTGCGAGATCCCTTGCGTGATTTCCAACCACAACGACCATGCTGC‑GCA‑GGTCGTTGTGG                                                                                                                                  <  2:197324/89‑1                                                                                         TGCACCGCTGGCACACCGATGAGCTGGACTGCGAGATCCCTTGCGTGATTTCCAACCACAACGACCATGCTGC‑GCA‑GGTCGTTGTG                                                                                                                                   >  1:216382/1‑86                                                                                         TGCACCGCTGGCACACCGATGAGCTGGACTGCGAGATCCCTTGCGTGATTTCCAACCACAACGACCATGCTGC‑GCA‑GGTCGTTGTG                                                                                                                                   <  2:216382/86‑1                                                                                                                                            CCAACCACAACGACC‑TGC‑GCAGCATGGTCG‑AGTGGTTGGAAATCACGCAAGGGATCTCGCAGTCCAGCTCATCGGTGTGCCAGCGGTGCAGCAAGTCTGCCAGGCAGTGCGACTCACGGCTGGCCATCAATACCACGCGTTTTTTCTGAG               >  1:1423506/1‑150                                                                                                                                                       gaaCATGCTGC‑GCA‑GGTCGTTGTGGTTGGAAATCACGCAAGGGATCTCGCAGTCCAGCTCATCGGTGTGCCAGCGGTGCAGCAAGTCTGCCAGGCAGTGCGACTCACGGCTGGCCATCCATACCACGCGTTTTTTCTGAGCCGAGTCGGT     >  2:416745/4‑150                                                                                                                                                         CCATGCTGC‑GCA‑GGTCGTTGTGGTTGGAAATCACGCAAGGGATCTCGCAGTCCAGCTCATCGGTGTGCCAGCGGTGCAGCAAGTCTGCCAGGCAGT                                                         >  1:468104/1‑96                                                                                                                                                         CCATGCTGC‑GCA‑GGTCGTTGTGGTTGGAAATCACGCAAGGGATCTCGCAGTCCAGCTCATCGGTGTGCCAGCGGTGCAGCAAGTCTGCCAGGCAGT                                                         <  2:468104/96‑1                                                                                                                                                          CATGCTGC‑GCA‑GGTCGTTGTGGTTGGAAATCACGCAAGGGATCTCGCAGTCCAGCTCATCGGTGTGCCAGCGGTGCAGCAAGTCTGCCAGGCAGTGCGACTCACGGCTGGCCATCAATACCACGCGTTTTTTCTGAGCCGAGTCGGTAAT  <  1:249778/150‑1                                                                                                                                                          CATGCTGC‑GCA‑GGTCGTTGTGGTTGGAAATCACGCAAGGGATCTCGCAGTCCAGCTCATCGGTGTGCCAGCGGTGCAGCAAGTCTGCCAGGCAGTGCGACTCACGGCTGGCCATCAATACCACGCGTTTTTTCTGAGCCGAGTCGGTAAT  >  2:635519/1‑150                                                                                                                                                                                                                                                                                                                   TCCATGACCTGGCGCATTACCGACTCGGCTCAGAAAAAACGCGTGGTATTGATGGCCAGCCGTGAGTCGCACTGCCTGGCAGACTTGCTGCACCGCTGGCACACCGATGAGCTGGACTGCGAGATCCCTTGCGTGATTTCCAACCACAACGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1556361‑1556514 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccATGCTGC‑GCA‑GGTCGTTGTGGTTGGAAATCACGCAAGGGATCTCGCAGTCCAGCTCATCGGTGTGCCAGCGGTGCAGCAAGTCTGCCAGGCAGTGCGACTCACGGCTGGCCATCAATACCACGCGTTTTTTCTGAGCCGAGTCGGTAAT  <  NC_002947/1556524‑1556376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.