New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1607234	56 (0.940)	6 (0.100)	6/230	NT	10.0%	coding (342/888 nt)	PP_1408	(R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase
	?	NC_002947	= 1607244	54 (0.940)					coding (332/888 nt)	PP_1408	(R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase

TTGCCGATGGTGTCATTGACCAGGTTGCCGACCTGATAACGGTCGCAGGCGGCCAGGTACTGGCAGCCACGGTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1607085‑1607234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCGCTGGC‑GCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGCCGATGCGCGACTATCTGGACCGTGGCTGCCAGTACCTGGCCGCCTGCGACCGTTATCAGGTCGGCAACCTGGTCAATGA  <  NC_002947/1607244‑1607097                                                                                                                                                                                                                                                                                                             TTGCCGATGGTGTCATTGACCAGGTTGCCGACCTGATAACGGCCGCAGGCGGCCAGGTACTGGCACCCACGGTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGG                                                                                                                                                       >  2:656899/1‑150                                                                        GTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCTGCTGGCGCTGGC‑GCACCAGCCGC                                                                                                                                    >  1:1072228/1‑97                                                                        GTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCTGCTGGCGCTGGC‑GCACCAGCCGC                                                                                                                                    <  2:1072228/97‑1                                                                                                               GAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGCGCTGGC‑GCACCAGCCGCGGTACGT                                                                                                                             <  1:1080098/65‑1                                                                                                               GAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGCGCTGGC‑GCACCAGCCGCGGTACGT                                                                                                                             >  2:1080098/1‑65                                                                                                                       TCACCACTGCCTTCTTCACGTACCGCGGCTGGTGC‑GCCAGCGCCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGC                                                                                 <  1:46340/101‑1                                                                                                                       TCACCACTGCCTTCTTCACGTACCGCGGCTGGTGC‑GCCAGCGCCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGC                                                                                 >  2:46340/1‑101                                                                                                                                                     GGCGCTGGC‑GCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGCCGATGCGCGACTATCTGGACCGTGGCTGCCAGTACCTGGCCGCCTGCGACCGTTATCAGGTCGGCAACCTGGTCAATGA  <  2:663421/150‑1                                                                                                                                                     GGCGCTGGC‑GCACCAGCCGCGGTACGTGAAGAAGGCAGTAGTGAGTTCGTTCTCGCCAGTGATCAACGAGCCGATGCGCGACTATCTGGACCGTGGCTGCCAGTACCTGGCCGCCTGCGACCGTTATCAGGTCGGCAACCTGGTCAATGA  <  1:834570/150‑1                                                                                                                                                                                                                                                                                                             TTGCCGATGGTGTCATTGACCAGGTTGCCGACCTGATAACGGTCGCAGGCGGCCAGGTACTGGCAGCCACGGTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1607085‑1607234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCGCTGGC‑GCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGCCGATGCGCGACTATCTGGACCGTGGCTGCCAGTACCTGGCCGCCTGCGACCGTTATCAGGTCGGCAACCTGGTCAATGA  <  NC_002947/1607244‑1607097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.