New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1695753 =	58 (0.970)	6 (0.110)	5/224	NT	11.3%	coding (388/648 nt)	PP_1491	CheW domain‑containing protein
	?	NC_002947	1695786 =	40 (0.720)					coding (421/648 nt)	PP_1491	CheW domain‑containing protein

CCACTGCCCAGCAACTGCGGGTCGAGCCGGTGAATACCGTCGATTTCCTCGACAGCCATCACCACCGGCCCGCCTTCGGCGGCCAGAATCAGCATACGTGGCATCGCCCGTGCGCTGCGTTGCTCGGTGGAGCCGGCCTGCACCCCGAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1695904‑1695753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagcaaCGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGTTGCTGGGCAGTGGCCGGGACGCCACACGCTTCACCGCCGCAG  >  NC_002947/1695786‑1695933                                                                                                                                                                                                                                                                                                              CCACTGCCCAGCAACTGCGGGTCGAGCCGGTGAATACCGTCGATTTCCTCGACAGCCATCACCACCGGCCCGCCTTCGGCGGCCAGAATCAGCATAAATATGATCGCCCGTGCGCTGCGTTGCTCGGTGGAGCCGGCCTGCACCCCGAGC                                                                                                                                                        >  1:1178814/1‑150  CACTGCCCAGCAACTGCGGGTCGAGCCGGTGAATACCGTCGATTTCCTCGACAGCCATCACCACCGGCCCGCCTTCGGCGGCCAGAATCAGCATACGTGGCATCGCCCGTGCGCTGCGTTGCTCGGTGGAGCCGGCCTGCACCCCGAGCA                                                                                                                                                       >  2:1320129/1‑150   ACTGCCCAGCAACTGCGGGTCGAGCCGGTGAATACCGTCGATTTCCTCGACAGCCATCACCACCGGCCCGCCTTCGGCGGCCAGAATCAGCATACGTGGCATCGCCCGTGCGCTGCGTTGCTCGGTGGAGCCGGCCTGCACCCCGAGCAA                                                                                                                                                      <  1:299623/150‑1                              GTGAATACCGTCGATTTCCTCGACAGCCATCACCACCGGCCCGCCTTCGGCGGCCAGAATCAGCATACGTGGCATCGCCCGTGCGCTGCGTTGCTCGGTGGAGCCGGCCTGCACCCCGAGCAA                                                                                                                                                      >  2:1023110/1‑123                              GTGAATACCGTCGATTTCCTCGACAGCCATCACCACCGGCCCGCCTTCGGCGGCCAGAATCAGCATACGTGGCATCGCCCGTGCGCTGCGTTGCTCGGTGGAGCCGGCCTGCACCCCGAGCAA                                                                                                                                                      <  1:1023110/123‑1                                                                                                                            TCGGTGGAGCCGGCCTGCACCCCGAGCAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGC                                                                                                      <  2:419463/77‑1                                                                                                                            TCGGTGGAGCCGGCCTGCACCCCGAGCAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGC                                                                                                      >  1:419463/1‑77                                                                                                                            TCGGTGGAGCCGGCCTGCA‑‑CCGAGCAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAAT                                                                         >  1:833671/1‑104                                                                                                                            TCGGTGGAGCCGGCCTGCA‑‑CCGAGCAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAAT                                                                         <  2:833671/104‑1                                                                                                                             CGGTGGAGCCGGCCTGCACCCCGAGCAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAG                                                                                                        <  1:426368/74‑1                                                                                                                             CGGTGGAGCCGGCCTGCACCCCGAGCAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAG                                                                                                        >  2:426368/1‑74                                                                                                                                                   GAGCAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGTTGCTGGGCAGTGGCCGGGACGCCACACGCTTCACCGCC      >  1:222185/1‑150                                                                                                                                                   GAGCAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGATGCTGGGCAGTGGCCGGGACGCCACACGCTTCACCGCC      >  1:1167659/1‑150                                                                                                                                                      CAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGTTGCTGGGCAGTGGCCGGGACGCCACACGCTTCACCGCCGCA   <  2:1460214/150‑1                                                                                                                                                      CAACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGTTGCTGGGCAGTGGCCGGGACGCCACACGCTTCACCGCCGCA   <  1:1538702/150‑1                                                                                                                                                       AACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGTTGCTGGGCAGTGGCCGGGACGCCACACGCTTCACCGCCGCAG  >  2:1233085/1‑150                                                                                                                                                       AACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGTTGCTGGGCAGTGGCCGGGACGCCACA                  <  1:538488/134‑1                                                                                                                                                       AACGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGTTGCTGGGCAGTGGCCGGGACGCCACA                  >  2:538488/1‑134                                                                                                                                                                                                                                                                                                              CCACTGCCCAGCAACTGCGGGTCGAGCCGGTGAATACCGTCGATTTCCTCGACAGCCATCACCACCGGCCCGCCTTCGGCGGCCAGAATCAGCATACGTGGCATCGCCCGTGCGCTGCGTTGCTCGGTGGAGCCGGCCTGCACCCCGAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1695904‑1695753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagcaaCGCAGCGCACGGGCGATGCCACGTATGCTGATTCTGGCCGCCGAAGGCGGGCCGGTGGTGATGGCTGTCGAGGAAATCGACGGTATTCACCGGCTCGACCCGCAGTTGCTGGGCAGTGGCCGGGACGCCACACGCTTCACCGCCGCAG  >  NC_002947/1695786‑1695933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.