| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1757543 | 55 (0.920) | 4 (0.070) | 4/236 | NT | 6.3% | coding (557/1686 nt) | PP_1563 | terminase large subunit |
| ? | NC_002947 | = 1757566 | 64 (1.090) | coding (580/1686 nt) | PP_1563 | terminase large subunit | |||||
GAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1757455‑1757543‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGTCCCCGGGCTTGCCGATGACAGGCTCGAAGCGCGATCCATCGGCCAGAACGACCATGTTGGATGCGTTCACGTCGACGCCATAGTGCTCCCGCAAGTCGTCGGTACGCTCGACCATCAGCTTGGCCGGCCTGAACACCTCCCAGGCC < NC_002947/1757566‑1757418 GAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCCGTCCCCGGGCTTGCCGATGACAGGCTCGAA < 1:1287005/120‑1GAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCCGTCCCCGGGCTTGCCGATGACAGGCTCGAA > 2:1287005/1‑120 ACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCCGTCCCCGGGCTTGCCGATGACAGGCTC < 1:1068381/65‑1 ACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCCGTCCCCGGGCTTGCCGATGACAGGCTC > 2:1068381/1‑65 CCCGTCCCCGGGCTTGCCGATGACAGGCTCGAAGCGCGATCCATCGGCCAGAACGACCATGTTGGATGCGTTCACGTCGACGCCATAGTGCTCCCGCAAGTCGTCGGTACGCTCGACCATCAGCTTGGCCGGCCTGAACACCTCCCAGGC > 1:1347015/1‑150 CCCGTCCCCGGGCTTGCCGATGACAGGCTCGAAGCGCGATCCATCGGCCAGAACGACCATGTTGGATGCGTTCACGTCGACGCCATAGTGCTCCCGCAAGTCGTCGGTACGCTCGACCATCAGCTTGGCCGGCCTGAACACCTCCCAGGC < 1:396750/150‑1 CCCGTCCCCGGGCTTGCCGATGACAGGCTCGAAGCGCGATCCATCGGCCAGAACGACCATGTTGGATGCGTTCACGTCGACGCCATAGTGCTCCCGCAAGTCGTCGGTACGCTCGACCATCAGCTTGGCCGGCCTGAACACCTCCCAGGC < 1:823469/150‑1 CCCGTCCCCGGACTCGCCGATGACAGGCTCGAAGCGCGATCCATCGGCCAGAACGACCATGTTGGATGCGTTCACGTCGACGCCATAGTGCTCCCGCAAGTCGTCGGTACGCTCGACCATCAGCTTGGCCGGCCTGAACACCTCCCAGGC < 1:1255970/150‑1 CCGTCCCCGGGCTTGCCGATGACAGGCTCGAAGCGCGATCCATCGGCGGGAACGATCATGTTGGAGGCGTTCACGTCGACGCCATAGTGCTCCCGCAAGTCGTCGGTACGCTCGACCATCAGCTTGGCCGGCCTGAACACCTCCCAGGCC > 2:638856/1‑150 CCGTCCCCGGGCTTGCCGATGACAGGCTCGAAGCGCGATCCATCGGCCAGAACGACCATGTTGGATGCGTTCACGTCGACGCCATAGTGCTCCCGCAAGTCGTCGGTACGCTCGACCATCAGCTTGGCCGGCCTGAACACCTCCCAGGCC > 2:845086/1‑150 GAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1757455‑1757543‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGTCCCCGGGCTTGCCGATGACAGGCTCGAAGCGCGATCCATCGGCCAGAACGACCATGTTGGATGCGTTCACGTCGACGCCATAGTGCTCCCGCAAGTCGTCGGTACGCTCGACCATCAGCTTGGCCGGCCTGAACACCTCCCAGGCC < NC_002947/1757566‑1757418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |