New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1757543	55 (0.920)	4 (0.070)	4/236	NT	6.3%	coding (557/1686 nt)	PP_1563	terminase large subunit
	?	NC_002947	= 1757566	64 (1.090)					coding (580/1686 nt)	PP_1563	terminase large subunit

AGGCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCAAGTATTGGCGGCCCCTGC  >  NC_002947/1757417‑1757715                                                                                                                                                      |                                                                                                                                                      aGGCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACg                                                                                                                                                       >  2:1347015/1‑150 (MQ=255)  ggCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCCTCCAACATGATCGTTCCCGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGg                                                                                                                                                      >  2:638856‑M2/1‑149 (MQ=255)  ggCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGg                                                                                                                                                      >  2:845086‑M2/1‑149 (MQ=255)   gCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCGAGTCCGGGGACGgg                                                                                                                                                     <  1:1255970‑M2/150‑3 (MQ=255)   gCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGgg                                                                                                                                                     <  1:823469‑M2/150‑3 (MQ=255)   gCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGgg                                                                                                                                                     <  1:396750‑M2/150‑3 (MQ=255)   gCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGgg                                                                                                                                                     >  1:1347015‑M2/1‑148 (MQ=255)     cTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTc                                                                                                                                                   <  2:783209/150‑1 (MQ=255)     cTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTc                                                                                                                                                   >  1:783209/1‑150 (MQ=255)      tGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCTGGGGACGGGTCa                                                                                                                                                  >  1:1138731/1‑150 (MQ=255)                tCAGGCCGGCCAAGCTGGTGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGAACGCGCTTAAAGCCTCGCCACGCCTTGCGCGGGGACGGTGCATCTCcgtcgt                                                                                                                                        >  2:835192/1‑150 (MQ=255)                tCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCcgtcgt                                                                                                                                        <  1:1592243/150‑1 (MQ=255)                          cAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCcgt                                                                                                                                           <  2:21313/137‑1 (MQ=255)                          cAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCcgt                                                                                                                                           >  1:21313/1‑137 (MQ=255)                           aaGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCCGCATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGgtggtg                                                                                                                             <  1:835192/150‑1 (MQ=255)                              cTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGAc                                                                                                                          <  1:748562/150‑1 (MQ=255)                               tGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACg                                                                                                                         <  1:160982/150‑1 (MQ=255)                                     tCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATc                                                                                                                   >  2:469070/1‑150 (MQ=255)                                       gAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATGTCCGTCGTGTTCGGTGGTGGACGAATATCAc                                                                                                                 >  1:363759/1‑150 (MQ=255)                                       gAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCAc                                                                                                                 >  1:939971/1‑150 (MQ=255)                                                gacgacTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCaa                                                                                                        <  2:948021/150‑1 (MQ=255)                                                gacgacTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCaa                                                                                                        >  1:182393/1‑150 (MQ=255)                                                   gacTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGa                                                                                                      <  2:1107839/149‑1 (MQ=255)                                                   gacTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGa                                                                                                      >  1:1107839/1‑149 (MQ=255)                                                          gggAGTACTATGGCGGCGACTTTAATGTTTACAACGTGGTCGTTCTGGTTGATGGATCGCGCTTCGAGCCTGTTATAGGCAAGCCCGTGGTTGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAAGATCATGAACACCAGGACACGACGc                                                                                              <  2:566385/150‑1 (MQ=255)                                                             aGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGATGt                                                                                           >  1:274777/1‑150 (MQ=255)                                                                 cTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGa                                                                                       >  1:1213185/1‑150 (MQ=255)                                                                        gTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATg                                                                                <  2:28030/150‑1 (MQ=255)                                                                                     cATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCTGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATgg                                                                   <  2:1138731/150‑1 (MQ=255)                                                                                     cATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATgg                                                                   <  2:823469/150‑1 (MQ=255)                                                                                     cATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATgg                                                                   >  1:717938/1‑150 (MQ=255)                                                                                      aTCCAACGTGGGCGTTCTGGCCGATGTATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGTTTATTTCCGTCTTGTTCGGTGGTTGACGAATATCACGAACACCAAGACTCCACGCTGTGCGACACGATGGAGACCGGGATggg                                                                  >  2:752662/1‑150 (MQ=255)                                                                                      aTCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCgtgt                                                                                                                                      >  2:1097908/1‑82 (MQ=255)                                                                                      aTCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCgtgt                                                                                                                                      <  1:1097908/82‑1 (MQ=255)                                                                                        ccAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATg                                                                                <  2:805963/134‑1 (MQ=255)                                                                                        ccAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATg                                                                                >  1:805963/1‑134 (MQ=255)                                                                                         cAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGc                                                               >  1:600266/1‑150 (MQ=255)                                                                                          aaCATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGcc                                                              >  1:923038/1‑150 (MQ=255)                                                                                                 tCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGgag                                                                             >  2:1075701/1‑128 (MQ=255)                                                                                                 tCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGgag                                                                             <  1:1075701/128‑1 (MQ=255)                                                                                                 tCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGc                                                       >  1:1044270/1‑150 (MQ=255)                                                                                                         gCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCcgc                                                           <  1:597833/138‑1 (MQ=255)                                                                                                         gCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCcgc                                                           >  2:597833/1‑138 (MQ=255)                                                                                                         gCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCcatc                                               <  2:939971/150‑1 (MQ=255)                                                                                                                  tCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTg                                      <  2:227429/150‑1 (MQ=255)                                                                                                                  tCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCATCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTg                                      <  1:1527518/150‑1 (MQ=255)                                                                                                                       cTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGcc                                                              <  1:698657/121‑1 (MQ=255)                                                                                                                       cTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGcc                                                              >  2:698657/1‑121 (MQ=255)                                                                                                                        ttCGAGCCTGTCATCGGCAAGCCCGGGGACGggctcgaagcgcgatccatcggccagaacgaccatgttggatgcgttcacgtcgacgccatagtgctcccgcaagtcgtcggtacgctc                                                              >  2:1287005‑M2/1‑31 (MQ=255)                                                                                                                        ttCGAGCCTGTCATCGGCAAGCCCGGGGACGggctcgaagcgcgatccatcggccagaacgaccatgttggatgcgttcacgtcgacgccatagtgctcccgcaagtcgtcggtacgctc                                                              <  1:1287005‑M2/120‑90 (MQ=255)                                                                                                                        ttCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATggggg                                                                >  1:1487934/1‑118 (MQ=255)                                                                                                                        ttCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATggggg                                                                <  2:1487934/118‑1 (MQ=255)                                                                                                                        ttCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATcacc                                >  1:1440663/1‑150 (MQ=255)                                                                                                                         tCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATcacca                               <  2:1440663/150‑1 (MQ=255)                                                                                                                           gAGCCTGTCATCGGCAAGCCCGGGGACGggctcgaagcgcgatccatcggccagaacgaccatgt                                                                                                                  >  2:1068381‑M2/1‑28 (MQ=255)                                                                                                                           gAGCCTGTCATCGGCAAGCCCGGGGACGggctcgaagcgcgatccatcggccagaacgaccatgt                                                                                                                  <  1:1068381‑M2/65‑38 (MQ=255)                                                                                                                            aGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCggtg                                                                                                                                <  2:181170/50‑1 (MQ=255)                                                                                                                            aGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCggtg                                                                                                                                >  1:181170/1‑50 (MQ=255)                                                                                                                            aGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCAcgg                            >  1:733015/1‑150 (MQ=255)                                                                                                                                  tCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGga                                                                              >  2:1479525/1‑94 (MQ=255)                                                                                                                                  tCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGga                                                                              <  1:1479525/94‑1 (MQ=255)                                                                                                                                  tCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATAGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCt                      >  2:805652/1‑150 (MQ=255)                                                                                                                                     tCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCaa                   <  2:733015/150‑1 (MQ=255)                                                                                                                                       ggCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCg                                                                         >  2:399220/1‑94 (MQ=255)                                                                                                                                       ggCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCg                                                                         <  1:399220/94‑1 (MQ=255)                                                                                                                                        gCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTAc                                                                                         <  2:536221/77‑1 (MQ=255)                                                                                                                                        gCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTAc                                                                                         >  1:536221/1‑77 (MQ=255)                                                                                                                                        gCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATg                                                                                <  2:1409969/86‑1 (MQ=255)                                                                                                                                        gCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATg                                                                                >  1:1409969/1‑86 (MQ=255)                                                                                                                                         ggagtccGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCAAGTAt               <  2:1255970/145‑1 (MQ=255)                                                                                                                                         cAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCAAGTAt               >  1:802778/1‑150 (MQ=255)                                                                                                                                          aaGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATgg                                                                   >  1:1322461/1‑97 (MQ=255)                                                                                                                                          aaGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATgg                                                                   <  2:1322461/97‑1 (MQ=255)                                                                                                                                            gCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATg                                                                                <  2:708309/82‑1 (MQ=255)                                                                                                                                            gCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATg                                                                                >  1:708309/1‑82 (MQ=255)                                                                                                                                              ccGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCca                                                 <  2:64396/111‑1 (MQ=255)                                                                                                                                              ccGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCca                                                 >  1:64396/1‑111 (MQ=255)                                                                                                                                                 gggACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCAAGTATTGGCGGcc       >  2:459212/1‑150 (MQ=255)                                                                                                                                                    aCGGGGCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCAAGTATTGGCGGCCCCt    <  2:182393/150‑1 (MQ=255)                                                                                                                                                      gggTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCAAGTATTGGCGGCCCCTGc  <  1:469070/150‑1 (MQ=255)                                                                                                                                                      gggTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCAAGTATTGGCGGCCCCTGc  >  2:35357/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      AGGCCTGGGAGGTGTTCAGGCCGGCCAAGCTGATGGTCGAGCGTACCGACGACTTGCGGGAGCACTATGGCGTCGACGTGAACGCATCCAACATGGTCGTTCTGGCCGATGGATCGCGCTTCGAGCCTGTCATCGGCAAGCCCGGGGACGGGTCATCGCCGTCGTGTTCGGTGGTGGACGAATATCACGAACACCAAGACTCCACGCTGTACGACACGATGGAGACCGGGATGGGGGCCCGCGAGCAACCCATCATGCTGGTGATCACCACGGCGGGCTCAAGTATTGGCGGCCCCTGC  >  NC_002947/1757417‑1757715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.