New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1923945 = | 59 (0.990) | 5 (0.090) | 5/232 | NT | 7.6% | coding (137/795 nt) | PP_1723 | 2‑aminoethylphosphonate ABC transporter permease |
? | NC_002947 | 1923969 = | 64 (1.110) | coding (113/795 nt) | PP_1723 | 2‑aminoethylphosphonate ABC transporter permease |
ACTCGCTGGCCACCAGCTGGTCGGCGAGCCTGCTGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1923984‑1923945 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTACCACC > NC_002947/1923969‑1924116 ACTCGCTGGCCACCAGCTGGTCGGCGAGCCT‑‑‑‑‑‑‑‑GCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCAGGATCGGATGTCAGCGCGCATGGTAG > 2:776617/1‑150 ACCAGCTGGTCGGCGAGCCTGCTGCCCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGG < 1:1296854/104‑1 ACCAGCTGGTCGGCGAGCCTGCTGCCCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGG > 2:1296854/1‑104 GCTGGTCGGCGAGCCTGCTGCCCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGG > 1:1599273/1‑73 GCTGGTCGGCGAGCCTGCTGCCCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGG < 2:1599273/73‑1 AGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTACCACC < 2:1300248/150‑1 AGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCAT < 1:1040748/138‑1 AGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCAT > 2:1040748/1‑138 ACTCGCTGGCCACCAGCTGGTCGGCGAGCCTGCTGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1923984‑1923945 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTACCACC > NC_002947/1923969‑1924116 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |