New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1923945 =59 (0.990)5 (0.090) 5/232 NT 7.6% coding (137/795 nt) PP_1723 2‑aminoethylphosphonate ABC transporter permease
?NC_002947 1923969 = 64 (1.110)coding (113/795 nt) PP_1723 2‑aminoethylphosphonate ABC transporter permease

GCAAGATCAGCACCACCGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTACCACC  >  NC_002947/1923826‑1924116
                                                                                                                                               |                                                                                                                                                   
gCAAGATCAGCACCACCGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCtggtgg                                                                                                                                               >  2:29092/1‑150 (MQ=255)
 ctaccatgcgcgctgacatccgatcctgcggctggtaccaccgcctcgtggtctacctgctgttcctgatcctgctgctgcccctggccggcaccctcctctactcgctggccaccagC‑‑‑‑‑‑‑‑AGGCTCGCCGACCAGCTGGTGGCCAGCGAGt                                                                                                                                      >  2:776617‑M1/119‑150 (MQ=255)
     aTCAGCACCACCGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGc                                                                                                                                          <  1:724791/150‑1 (MQ=255)
      tCAGCACCACCGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCg                                                                                                                                         >  2:1220788/1‑150 (MQ=255)
         gCACCACCGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGt                                                                                                                                      <  2:526295/150‑1 (MQ=255)
          caccacCGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTa                                                                                                                                     >  2:1027988/1‑150 (MQ=255)
          caccacCGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTa                                                                                                                                     >  1:304808/1‑150 (MQ=255)
           accaccGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCACGCCACTGGGCAGCAGGCCCGCCGACCAGCTGGTGGCCAGCgaggag                                                                                                                                    >  2:218886/1‑150 (MQ=255)
              accGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAg                                                                                                                                       >  2:974782/1‑144 (MQ=255)
              accGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAg                                                                                                                                       <  1:974782/144‑1 (MQ=255)
                 gACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGaggagg                                                                                                                              <  1:1027988/150‑1 (MQ=255)
                 gACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGaggagg                                                                                                                              <  2:71346/150‑1 (MQ=255)
                  aCAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAggg                                                                                                                             <  1:584949/150‑1 (MQ=255)
                     gcagcagcGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGc                                                                                                                          <  2:1407390/150‑1 (MQ=255)
                         cagcGCGCCTACGCACACCAGCCGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCCCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGc                                                                                                                      >  2:553752/1‑150 (MQ=255)
                           gcgcgcCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCa                                                                                                                    >  1:388756/1‑150 (MQ=255)
                               gcCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAgggg                                                                                                                <  1:532403/150‑1 (MQ=255)
                                ccTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGgc                                                                                                               <  1:218886/150‑1 (MQ=255)
                                 cTACGCACACCAGCAGCGACTGGCCGAAGGCCGCTATGAAGCGCGGCTCGCTCCACAGCGCCGCTATTCGCTTCAGAGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGgca                                                                                                              <  1:29092/150‑1 (MQ=255)
                                       acacCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGgcagcagca                                                                                                        >  2:699415/1‑150 (MQ=255)
                                           cagcagCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGAt                                                                                                    <  1:699415/150‑1 (MQ=255)
                                           cagcagCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGAt                                                                                                    >  1:1540199/1‑150 (MQ=255)
                                            cctcgtggtctacctgctgttcctgatcctgctgctgcccctggccggcaccctcctctactcgctggccaccagCTGGGCAGCAGGCTCGCCGACCAGCtggt                                                                                                                                                 <  1:1296854‑M1/29‑1 (MQ=255)
                                            cctcgtggtctacctgctgttcctgatcctgctgctgcccctggccggcaccctcctctactcgctggccaccagCTGGGCAGCAGGCTCGCCGACCAGCtggt                                                                                                                                                 >  2:1296854‑M1/76‑104 (MQ=255)
                                              cagcGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAg                                                                                                 <  1:1220788/150‑1 (MQ=255)
                                                 cGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGaa                                                                                              <  2:1137390/150‑1 (MQ=255)
                                                     tGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAAcagc                                                                                          >  1:687334/1‑150 (MQ=255)
                                                     tGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAAcagc                                                                                          <  1:1271672/150‑1 (MQ=255)
                                                       gCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCa                                                                                                  <  1:337661/140‑1 (MQ=255)
                                                       gCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCa                                                                                                  >  2:337661/1‑140 (MQ=255)
                                                       gCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAAcagcag                                                                                        >  2:1194663/1‑150 (MQ=255)
                                                        ccGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGgcagca                                                                                                           <  1:1340572/130‑1 (MQ=255)
                                                        ccGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGgcagca                                                                                                           >  2:1340572/1‑130 (MQ=255)
                                                         cGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCAGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGt                                                                                      <  2:1421120/150‑1 (MQ=255)
                                                          gAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGGCAGGGGCAGCAGCAGGAGCAGGAACAGCAGGTa                                                                                     >  1:597352/1‑150 (MQ=255)
                                                             ggCCGCGAGTAAGAGCGGCTCGCTCCCCAGCGTCCCATACCACCTCCCGGTGAGACCACCGGCCAGCAGGCTCCCCTACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGAc                                                                                  <  2:183663/150‑1 (MQ=255)
                                                                   gAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGcagcagcag                                                                                                       >  2:1017648/1‑123 (MQ=255)
                                                                   gAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGCCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGcagcagcag                                                                                                       <  1:1017648/123‑1 (MQ=255)
                                                                      gAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCg                                                                         <  1:460743/150‑1 (MQ=255)
                                                                       cctgctgctgcccctggccggcaccctcctctactcgctggccaccagCTGGGCAGCAGGCTCGCCGACCAGc                                                                                                                                                     >  1:1599273‑M1/49‑73 (MQ=255)
                                                                       cctgctgctgcccctggccggcaccctcctctactcgctggccaccagCTGGGCAGCAGGCTCGCCGACCAGc                                                                                                                                                     <  2:1599273‑M1/25‑1 (MQ=255)
                                                                       aaGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCgg                                                                        <  2:1341623/150‑1 (MQ=255)
                                                                             ggCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTAc                                                                  <  1:1194663/150‑1 (MQ=255)
                                                                               ctcgctcCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCa                                                                >  1:1300248/1‑150 (MQ=255)
                                                                                    tcCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAgccgc                                                           >  1:234176/1‑150 (MQ=255)
                                                                                     ccACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAgccgcc                                                          <  2:304808/150‑1 (MQ=255)
                                                                                      cacaGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGccgccg                                                         >  1:1501489/1‑150 (MQ=255)
                                                                                       acaGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCgg                                                        >  1:949162/1‑150 (MQ=255)
                                                                                         aGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGaa                                                      <  2:1350260/150‑1 (MQ=255)
                                                                                          gcgcCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAAc                                                     <  2:396235/150‑1 (MQ=255)
                                                                                              cgcATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGAt                                                 <  2:1501489/150‑1 (MQ=255)
                                                                                                 aTACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTc                                              >  1:1113123/1‑150 (MQ=255)
                                                                                                  tACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCa                                             >  2:800793/1‑150 (MQ=255)
                                                                                                   aCCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAg                                                                                                 <  1:1047635/97‑1 (MQ=255)
                                                                                                   aCCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAg                                                                                                 >  2:1047635/1‑97 (MQ=255)
                                                                                                              gTCCGGCCACTGGGCAGCATGCTCGCCGACCAGCTGGTGGCCAGCGCGCTTATGAGGGTGCCGCCCAGGGGCAGCAGCAGGATCAGGATCAGCAGTTAGACCACGAGGCGGTGGTACCAGCCGCTGGAACGGATGTCAGCGCGCATGGTa                                 <  1:99471/150‑1 (MQ=255)
                                                                                                               actcgctggccaccagctggtcggcgagcctgCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCAGGATCGGATGTCAGCGCGCATGGTAg                                >  2:776617‑M2/33‑150 (MQ=255)
                                                                                                                  accagctggtcggcgagcctgctgcccagCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAgg                                                                           >  2:1296854‑M2/30‑104 (MQ=255)
                                                                                                                  accagctggtcggcgagcctgctgcccagCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAgg                                                                           <  1:1296854‑M2/75‑1 (MQ=255)
                                                                                                                     cACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAgccgc                                                           <  1:175211/117‑1 (MQ=255)
                                                                                                                     cACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAgccgc                                                           >  2:175211/1‑117 (MQ=255)
                                                                                                                      gctggtcggcgagcctgctgcccagCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAgg                                                                                                      <  2:1599273‑M2/48‑1 (MQ=255)
                                                                                                                      gctggtcggcgagcctgctgcccagCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAgg                                                                                                      >  1:1599273‑M2/26‑73 (MQ=255)
                                                                                                                      aCTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCttt                         <  2:373048/150‑1 (MQ=255)
                                                                                                                            cagcagGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCg                                                                         <  1:1168059/96‑1 (MQ=255)
                                                                                                                            cagcagGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCg                                                                         >  2:1168059/1‑96 (MQ=255)
                                                                                                                                  gCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGCGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCAtt             >  2:1477792/1‑150 (MQ=255)
                                                                                                                                  gCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTcagca                   >  2:1389797/1‑144 (MQ=255)
                                                                                                                                  gCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTcagca                   <  1:1389797/144‑1 (MQ=255)
                                                                                                                                    tCGCCGACCAGCTGGTGGCCAGCGAGTATAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCCGGTAACCCCCGGGGCGGGGTGACCAGCCGCCGGAACGAATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGa           >  1:607682/1‑150 (MQ=255)
                                                                                                                                    tCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCGAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAgccgcc                                                          >  2:1191638/1‑103 (MQ=255)
                                                                                                                                    tCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAgccgcc                                                          <  1:1191638/103‑1 (MQ=255)
                                                                                                                                     cGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGAt          <  1:800793/150‑1 (MQ=255)
                                                                                                                                     cGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGAt          <  2:1027841/150‑1 (MQ=255)
                                                                                                                                             agCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCAt              <  1:1040748‑M2/136‑1 (MQ=255)
                                                                                                                                             agCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCAt              >  2:1040748‑M2/3‑138 (MQ=255)
                                                                                                                                             agCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTaccacc  <  2:1300248‑M2/148‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
GCAAGATCAGCACCACCGACAGCAGCAGCGCGCCTACGCACACCAGCAGCGACTGGCCGAAGGCCGCGAGGAAGCGCGGCTCGCTCCACAGCGCCGCATACCACTTCAGGGTCAGGCCACTGGGCAGCAGGCTCGCCGACCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTACCACC  >  NC_002947/1923826‑1924116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.