| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1925745 = | 88 (1.470) | 6 (0.130) | 5/192 | NT | 8.7% | intergenic (‑2/+98) | PP_1725/PP_1726 | hypothetical protein/ABC transporter substrate‑binding protein |
| ? | NC_002947 | 1925810 = | 56 (1.170) | intergenic (‑67/+33) | PP_1725/PP_1726 | hypothetical protein/ABC transporter substrate‑binding protein | |||||
GCCGAAGCCTGGGAAGCCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1925917‑1925745‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggtttacccgcgaaAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCAGTTTCTTCGAGGTGGCTTCCCAGGCTTCGGCATTCTTGATCGGCTGGGCGGCAGCGTACTG > NC_002947/1925810‑1925947 GCCGAAGCCTGGGAAGCCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACAT < 2:1131368/150‑1 CGAAGCCTGGGAAGCCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGT > 1:299959/1‑150 GAAGCCTGGGAAGCCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTA > 1:1530695/1‑150 TGGGAAGCCACCTCGAAGAAAATGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCG > 1:1474056/1‑150 GGAAGCCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGG > 2:218306/1‑150 GGAAGCCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGG < 1:55472/150‑1 GAAGCCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGT < 2:225850/150‑1 CCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTAC > 1:1144249/1‑150 CACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACC > 1:1144935/1‑150 CCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCG < 1:1036379/150‑1 caaGAAGAAACTGCCGCAGATGGGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGC > 2:767470/4‑150 CTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGG < 2:415842/140‑1 CTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGG > 1:415842/1‑140 TCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGG < 2:943367/139‑1 TCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGG > 1:943367/1‑139 TGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAG < 1:1139762/102‑1 TGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAG > 2:1139762/1‑102 GATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGG < 2:1479357/104‑1 GATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGG > 1:1479357/1‑104 ATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTAC > 1:1279840/1‑106 ATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTAC < 2:1279840/106‑1 GTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCC < 1:1322059/77‑1 GTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCC > 2:1322059/1‑77 GCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGA > 1:656674/1‑117 GCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGA < 2:656674/117‑1 CCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCT > 1:239414/1‑108 CCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCAC < 2:417378/106‑1 CCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCAC > 1:417378/1‑106 CCGCCCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCT < 2:239414/108‑1 GTAGGAGCGGGTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCAGTTTCTTCGAGGTGGCTTCCCAGGCTTCGGCATTCTTGATCGGCTGGGCG < 2:1377039/150‑1 GGAGCGGGTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCAGTTTCTTCGAGGTGGCTTCCCAGGCTTCGGCATTCTTGATCGGCTGGGCGGCA < 1:1187437/150‑1 GGAGCGGGTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGAAGTTTGTTCGAGGTGGCTTCCCAGGCTTCGGCATTCTTGATCGGCTGGGCGGCA > 2:1118981/1‑150 GGTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCAGTTTCTTCGAGGTGGCTTCCCAGGCTTCGGCATTCTTGATCGGCTGGGCGGCAGCGTAC > 1:1452851/1‑150 GTTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCAGTTTCTTCGAGGTGGCTTCCCAGGCTTCGGCATTCTTGATCGGCTGGGCGGCAGCGTACT > 1:1362261/1‑150 TTTACCCGCGAAAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCAGTTTCTTCGAGGTGGCTTCCCAGGCTTCGGCATTCTTGATCGGCTGGGCGGCAGCGTACTG < 2:1362261/150‑1 CCGCGAAAGGGCAGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCA < 2:577282/84‑1 CCGCGAAAGGGCAGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCA > 1:577282/1‑84 GCCGAAGCCTGGGAAGCCACCTCGAAGAAACTGCCGCAGATGTGGCAGGAGCAGGTGATCATCGAGATGGAGTAAGGGGCTGGGCTTTGTAGTGCCTGATCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAGGGATACGCGATACATGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1925917‑1925745‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggtttacccgcgaaAGGGCCGGATCAGGCACTACAAAGCCCAGCCCCTTACTCCATCTCGATGATCACCTGCTCCTGCCACATCTGCGGCAGTTTCTTCGAGGTGGCTTCCCAGGCTTCGGCATTCTTGATCGGCTGGGCGGCAGCGTACTG > NC_002947/1925810‑1925947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |