| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3523465 | NA (NA) | 3 (0.050) | 3/228 | NT | NA | coding (135/1533 nt) | PP_3114 | transposase |
| ? | NC_002947 | = 3523493 | NA (NA) | coding (163/1533 nt) | PP_3114 | transposase | |||||
ATTCGGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3523312‑3523465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTTTTCG < NC_002947/3523493‑3523345 ATTCGGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCG > 1:375891/1‑150 TATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCA < 2:414939/147‑1 TATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATATCGAAGAGGAAGTTGCGCTGTTGCGCCA > 1:414939/1‑147 GTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCA > 1:722894/1‑98 GTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCA < 2:722894/98‑1 CTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATatgtac > 1:253110/1‑144 GCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTG > 1:234673/1‑107 GCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTG < 2:234673/107‑1 GCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAACTGCTTGAGCgga > 2:1558228/1‑127 AGTCTGCTAGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTTTTC > 2:1222662/1‑150 GTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGGGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGCGGTTTTCG > 2:192398/1‑150 ATTCGGTATAATCCGCGGCATGATTTCCATGCCCGAAAACCTCCCTGACGATCCGGTTCTGCTCAAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3523312‑3523465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGATCTTGCTCTTGTCGGACGCGCGCTCGTGGATCATCTGCTCAAGCAGTTGCTTGAGCAGAACCGGATCGTCAGGGAGGTTTTCG < NC_002947/3523493‑3523345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |