New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4964988 =	63 (1.050)	4 (0.070)	4/230	NT	6.0%	coding (415/1476 nt)	fleQ	transcriptional regulator FleQ
	?	NC_002947	4965012 =	66 (1.150)					coding (391/1476 nt)	fleQ	transcriptional regulator FleQ

ATTTCTTCCGCCGAGCTGCCGGAAGACCTTCGCCGCCGGGTGCTTTCCAACCTGGAAATGCCGCCAAGCTACAGCCAATTGCTGGACTCGCTGCACCGTGCCCAGGTCTACCGCGAAATGTATGACCAGGCGCGCGAGCGGGGTCGCCAGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4965141‑4964988 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgCCTGGTCATACATTTCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACC  >  NC_002947/4965012‑4965160                                                                                                                                                                                                                                                                                                                 ATTTCTTCCGCCGAGCTGCCGGAAGACCTTCGCCGCCGGGTGCTTTCCAACCTGGAAATGCCGCCAAGCTACAGCCAATTGCTGGACTCGCTGCACCGTGCCCAGGTCTACCGCGAAATGTATGACCAGGCGCGCGAGCGGGGTCGCCAG                                                                                                                                                           >  2:238582/1‑150                                                                                                                               CAGGCGCGCGAGCGGGGTCGCCAGCGCGCCTGGTCATACATTTCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGC                                                                                   >  1:1128376/1‑96                                                                                                                               CAGGCGCGCGAGCGGGGTCGCCAGCGCGCCTGGTCATACATTTCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGC                                                                                   <  2:1128376/96‑1                                                                                                                                AGGCGCGCGAGCGGGGTCGCCAGCGCGCCTGGTCATACATTTCGCGGTAGACCTGGGCACGGTGCAGCGA                                                                                                            >  1:53950/1‑70                                                                                                                                AGGCGCGCGAGCGGGGTCGCCAGCGCGCCTGGTCATACATTTCGCGGTAGACCTGGGCACGGTGCAGCGA                                                                                                            <  2:53950/70‑1                                                                                                                                                          GCCTGGTCATACATTTCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTAGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTGAAAGCAAAACC  >  2:207175/1‑150                                                                                                                                                                                                                                                                                                                 ATTTCTTCCGCCGAGCTGCCGGAAGACCTTCGCCGCCGGGTGCTTTCCAACCTGGAAATGCCGCCAAGCTACAGCCAATTGCTGGACTCGCTGCACCGTGCCCAGGTCTACCGCGAAATGTATGACCAGGCGCGCGAGCGGGGTCGCCAGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4965141‑4964988 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgCCTGGTCATACATTTCGCGGTAGACCTGGGCACGGTGCAGCGAGTCCAGCAATTGGCTGTAGCTTGGCGGCATTTCCAGGTTGGAAAGCACCCGGCGGCGAAGGTCTTCCGGCAGCTCGGCGGAAGAAATTTCACCTAAAAGCAAAACC  >  NC_002947/4965012‑4965160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.