New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5625659 =	61 (1.020)	4 (0.070)	4/232	NT	6.6%	coding (153/1131 nt)	PP_4943	glycosyl transferase
	?	NC_002947	5625684 =	55 (0.950)					coding (128/1131 nt)	PP_4943	glycosyl transferase

CCTCACCGGCGCCGCCGATGCGCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5625686‑5625659 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCT  >  NC_002947/5625684‑5625727                                                                          CCTCACCGGCGCCGCCGATGCGCAGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAA        >  1:1439516/1‑66 CCTCACCGGCGCCGCCGATGCGCAGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAA        <  2:1439516/66‑1   TCACCGGCGCCGCCGATGCGCAGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCT  >  1:55152/1‑70   TCACCGGCGCCGCCGATGCGCAGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCT  <  2:55152/70‑1                                                                          CCTCACCGGCGCCGCCGATGCGCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5625686‑5625659 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCT  >  NC_002947/5625684‑5625727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.