| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5625659 = | 61 (1.020) | 4 (0.070) | 4/232 | NT | 6.6% | coding (153/1131 nt) | PP_4943 | glycosyl transferase |
| ? | NC_002947 | 5625684 = | 55 (0.950) | coding (128/1131 nt) | PP_4943 | glycosyl transferase | |||||
TTGAAGCGGTGGGCGATGCAGAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCAGGATGCGCGGTTCAGAGCG > NC_002947/5625516‑5625802 | ttGAAGCGGTGGGCGATGCAGAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTgc > 1:1374/1‑150 (MQ=255) ggTGGGCGATGCAGAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATcgg < 2:319829/150‑1 (MQ=255) gATGCAGAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGcc < 1:1355928/150‑1 (MQ=255) gATGCAGAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGcc < 2:345537/150‑1 (MQ=255) aTGCAGAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCg < 1:229301/150‑1 (MQ=255) gAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAg > 2:1056556/1‑150 (MQ=255) gAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAg < 1:439031/150‑1 (MQ=255) gAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATAc < 2:522708/150‑1 (MQ=255) aTTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGt < 2:427700/150‑1 (MQ=255) ttGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATAcagcg < 1:1470895/150‑5 (MQ=255) ttGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTg < 2:186811/150‑1 (MQ=255) ttGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTg < 2:1211958/150‑1 (MQ=255) gcaatgcgccgcaatgcgcGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATc > 1:1612920/1‑113 (MQ=255) gcaatgcgccgcaatgcgcGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATc < 2:1612920/113‑1 (MQ=255) gcaatgcgccgcaatgcgcGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTAGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTAc > 2:1379087/1‑150 (MQ=255) cgccgcaatgcgcGGATGGCGCCGAGTTGCAGGCCACGCACGGCTTTGGAACTGAACTAAAGGAACAGCACCTCGTACGACGCACAGCCAGCCGCCAGCTGCGCATCGGCGGCGCCCGTGAGAAATACCCTGGTCCCCGGGGAcccgtgc < 2:69284/150‑5 (MQ=255) gccgcaatgcgcGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCCCCTCGTCCGACGCACAGCCAGCCGCCACCt < 1:299421/99‑1 (MQ=255) gccgcaatgcgcGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCt > 2:299421/1‑99 (MQ=255) cgcaatgcgcGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAAGTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTa > 1:936800/1‑140 (MQ=255) cgcaatgcgcGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTa < 2:936800/140‑1 (MQ=255) gcgGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAg > 2:1032563/1‑150 (MQ=255) cgGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAgg < 1:806791/150‑1 (MQ=255) cgGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAgg < 1:511546/150‑1 (MQ=255) gAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCGCCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACtt > 1:109895/1‑149 (MQ=255) tttCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACg > 1:1004270/1‑150 (MQ=255) tttCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACg > 2:1014872/1‑150 (MQ=255) tttCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACg > 2:1017284/1‑150 (MQ=255) gCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGa < 2:428200/89‑1 (MQ=255) gCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGa > 1:428200/1‑89 (MQ=255) ccACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTg > 2:296883/1‑132 (MQ=255) ccACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTg < 1:296883/132‑1 (MQ=255) cacgcacgGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACgg > 1:223305/1‑143 (MQ=255) cacgcacgGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACgg < 2:223305/143‑1 (MQ=255) gcacgGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGgcg > 2:864467/1‑143 (MQ=255) gcacgGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGgcg < 1:864467/143‑1 (MQ=255) gcacgGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCa > 2:395814/1‑150 (MQ=255) gCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAAc < 2:1374/150‑1 (MQ=255) ttGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGgc < 1:1135137/134‑1 (MQ=255) ttGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGgc > 2:1135137/1‑134 (MQ=255) ttGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGc > 1:61889/1‑150 (MQ=255) tGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGcc > 2:1335320/1‑150 (MQ=255) agcctgtttcaggggcgtgggtaccaggtgaccacggtattcctCACCTGCGCATCGGCGGCGCCGGTGa > 1:55152‑M1/45‑70 (MQ=255) agcctgtttcaggggcgtgggtaccaggtgaccacggtattcctCACCTGCGCATCGGCGGCGCCGGTGa < 2:55152‑M1/26‑1 (MQ=255) tttcaggggcgtgggtaccaggtgaccacggtattcctCACCTGCGCATCGGCGGCGCCGGTGAgg < 2:1439516‑M1/28‑1 (MQ=255) tttcaggggcgtgggtaccaggtgaccacggtattcctCACCTGCGCATCGGCGGCGCCGGTGAgg > 1:1439516‑M1/39‑66 (MQ=255) aaGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATg > 1:320615/1‑150 (MQ=255) aCAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGcc > 2:921333/1‑132 (MQ=255) aCAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGcc < 1:921333/132‑1 (MQ=255) cagcagCTCGTCCCACCAAACGCCAGTCGCCCCCTGCGCATCAGCGCAGACGGTGAGGCATACCGTGTTCACTTGTTATTCACGCCCCTGAAACAGGCTGGCGTACTGACTGGCGCATTCCAGGAACGGCCCGTCATAGCCATGGCCGac < 1:1056556/150‑2 (MQ=255) cAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGaa < 1:1032563/150‑1 (MQ=255) cACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACa > 1:280348/1‑92 (MQ=255) cACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACa < 2:280348/92‑1 (MQ=255) ccTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATa > 2:388243/1‑57 (MQ=255) ccTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATa < 1:388243/57‑1 (MQ=255) tCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCa < 1:1559025/145‑1 (MQ=255) tCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCa > 2:1559025/1‑145 (MQ=255) gACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCa < 1:721555/129‑1 (MQ=255) gACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCa > 2:721555/1‑129 (MQ=255) cGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCCCGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCAGGATGCGCgg < 1:1335320/150‑1 (MQ=255) gCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAGCAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGaa > 1:792750/1‑134 (MQ=255) gCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAGCAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGaa < 2:792750/134‑1 (MQ=255) gCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCAGGATGCGCGGt < 1:1379087/150‑1 (MQ=255) cacaGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCAGGATGCGCGGtt < 1:395814/150‑1 (MQ=255) acaGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATgg < 2:958973/127‑1 (MQ=255) acaGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATgg > 1:958973/1‑127 (MQ=255) acaGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCAGGATGCGCGGTTc > 2:571267/1‑150 (MQ=255) agccGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCAGGATGCGCGGTTCAGAGCg < 1:571267/150‑1 (MQ=255) | TTGAAGCGGTGGGCGATGCAGAAAGCGAAATTGCGCTCGGCCGCAATGCGCCGCAATGCGCGGATGGCGCCGAGTTTCAGGCCACGCACGGCCTTGGAACTGAACTCAAGGAACAGCACCTCGTCCGACGCACAGCCAGCCGCCACCTGCGCATCGGCGGCGCCGGTGAGGAATACCGTGGTCACCTGGTACCCACGCCCCTGAAACAGGCTGGCGTACTGACGGGCGCAGTCCAGGAACGGCCCGTCATAGCCATGGCAGAACTGCAGGATGCGCGGTTCAGAGCG > NC_002947/5625516‑5625802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |