New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5873252 =	48 (0.800)	4 (0.070)	4/226	NT	7.3%	intergenic (‑42/‑100)	rppH/PP_5147	RNA pyrophosphohydrolase/haloacid dehalogenase‑like family hydrolase
	?	NC_002947	5873287 =	56 (0.990)					intergenic (‑77/‑65)	rppH/PP_5147	RNA pyrophosphohydrolase/haloacid dehalogenase‑like family hydrolase

TCGCTGTCGCCACCGAGGAGGGTATTGTCCAGGTCGAATAAAGCCAGGCGCATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5873404‑5873252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcttATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTGGCGACAGCGACCATGCCTGGGGTGACTATCTTTGCGAGCG  >  NC_002947/5873287‑5873434                                                                                                                                                                                                                                                                                                               TCGCTGTCGCCACCGAGGAGGGTATTGTCCAGGTCGAATAAAGCCAGGCGCATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAG                                                                                                                                                         <  2:650320/150‑1       TCGCCACCGAGGAGGGTATTGTCCAGGTCGAATAAAGCCAGGCGCATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAA                                                                                                                                                          >  1:957100/1‑143       TCGCCACCGAGGAGGGTATTGTCCAGGTCGAATAAAGCCAGGCGCATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAA                                                                                                                                                          <  2:957100/143‑1                                    GAATAAAGCCAGGCGCATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAA                                                                                                                                                          <  1:880186/114‑1                                    GAATAAAGCCAGGCGCATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAA                                                                                                                                                          >  2:880186/1‑114                                                    ATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAG                                                                                                                                                         <  1:949956/99‑1                                                    ATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAG                                                                                                                                                         >  2:949956/1‑99                                                                                                                    CATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGT                                           >  1:936623/1‑145                                                                                                                    CATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGT                                           <  2:936623/145‑1                                                                                                                           TTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGC                                                                          <  1:1401744/107‑1                                                                                                                           TTGGCGGGCGCGTTGCTGCGCTCGCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGC                                                                          >  2:1401744/1‑107                                                                                                                                                   CAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTGGCGACAGCGACCATGCCTGGGGTGACTATCTTTGC       <  1:1216586/150‑1                                                                                                                                                        TTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTGGCGACAGCGACCATGCCTGGGGTGACTATCTTTGCGAGCG  >  1:1176861/1‑150                                                                                                                                                                                                                                                                                                               TCGCTGTCGCCACCGAGGAGGGTATTGTCCAGGTCGAATAAAGCCAGGCGCATCGCGGTCACTCGCATCAGCCACAGGGTAGGCCCGCAGAATACGGAGTTTTCACGCAGCTGCACATAAGCTTGGCGGGCGCGTTGCTGCGCTCGCAAGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5873404‑5873252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcttATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTGGCGACAGCGACCATGCCTGGGGTGACTATCTTTGCGAGCG  >  NC_002947/5873287‑5873434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.