New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	652768 =	58 (0.970)	4 (0.070)	4/226	NT	7.5%	intergenic (‑102/+16)	dsbD‑I/ctpL	thiol/disulfide interchange protein 1/methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	652811 =	44 (0.780)					coding (1935/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL

GGCCGGGCTGGCCAGCAGTAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGG  >  NC_002947/652619‑652913                                                                                                                                                      |                                                                                                                                                  ccgatgtaacggcacagcagagtggcgcggtgagcgagattcgtgaccacagcgagcggattcacgaactgggtgaagacaacctgcagcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacc                                                                                                                                                   <  1:491836‑M1/1‑1 (MQ=255)  gCCGGGCTGGCCAGCAGTAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCcgcgcg                                                                                                                                                  >  1:642033/1‑150 (MQ=255)  cgatgtaacggcacagcagagtggcgcggtgagcgagattcgtgaccacagcgagcggattcacgaactgggtgaagacaacctgcagcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacCg                                                                                                                                                  <  2:1295244‑M1/2‑1 (MQ=255)     tgtaacggcacagcagagtggcgcggtgagcgaggttcgtgaccacagcgagcggattcacgaactgggtgaagacaacctgcagcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacCGggc                                                                                                                                               <  1:66445‑M1/5‑1 (MQ=255)          ggCCAGCAGTAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGgcgc                                                                                                                                          <  1:1492594/150‑1 (MQ=255)            ccAGCAGTAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTc                                                                                                                                        <  2:829913/150‑1 (MQ=255)             cagcagTAGGAACAGCATGAACAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCCCGCGCGGCGCttc                                                                                                                                       <  2:842702/150‑3 (MQ=255)             cagcagTAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGAATAGCGAGATGGAACGTGCCAGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCg                                                                                                                                       >  1:693008/1‑150 (MQ=255)               gcagTAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCCCGCGCGGCGCttcgc                                                                                                                                     <  2:1299400/150‑5 (MQ=255)                 agTAGGAACAGCATGAAAAACAGGCGGCGCAGGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGAtct                                                                                                                                   <  1:974268/150‑1 (MQ=255)                   tAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACCAACGTATGATCGGGGTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCa                                                                                                                                 <  1:31251/150‑1 (MQ=255)                   tAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCa                                                                                                                                 >  2:214217/1‑150 (MQ=255)                   tAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCa                                                                                                                                 <  1:406778/150‑1 (MQ=255)                            cATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGAAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGaa                                                                                                                        >  2:792913/1‑150 (MQ=255)                                aaaaaCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCAGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAGCGTAGGAGCGGGTTTCCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCt                                                                                                                    <  2:693008/150‑1 (MQ=255)                                 aaaaCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTc                                                                                                                   <  1:1048971/150‑1 (MQ=255)                                  aaaCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGTGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCg                                                                                                                  >  2:1548829/1‑150 (MQ=255)                                   aaCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGc                                                                                                                 >  2:1646308/1‑150 (MQ=255)                                   aaCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGc                                                                                                                 >  1:1246089/1‑150 (MQ=255)                                    aCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTc                                                                                                                                        <  2:548740/126‑1 (MQ=255)                                    aCAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTc                                                                                                                                        >  1:548740/1‑126 (MQ=255)                                           gcgcATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCg                                                                                                         <  2:60968/150‑1 (MQ=255)                                           gcgcATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCg                                                                                                         <  2:1246089/150‑1 (MQ=255)                                               aTGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTc                                                                                                     >  2:66445/1‑150 (MQ=255)                                                 ggCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGa                                                                                                                                      <  1:1414747/115‑1 (MQ=255)                                                 ggCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGa                                                                                                                                      >  2:1414747/1‑115 (MQ=255)                                                 ggCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCACACCGCCCGGTTCAg                                                                                                   <  2:642033/150‑1 (MQ=255)                                                   cGGACTCGCGAGGTGGAACGTGCCCGGCATGCTAACGGATGCGCAGGGATAATTAGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGTCGGCGCTCGATCTCAGACCCTGAACGCTCGGACCGCCCGGTTCAGCt                                                                                                 >  1:859132/1‑150 (MQ=37)                                                       agcggattcacgaactgggtgaagacaacctgcagcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGc                                                                                                  >  2:1199487‑M1/96‑145 (MQ=255)                                                       agcggattcacgaactgggtgaagacaacctgcagcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGc                                                                                                  <  1:1199487‑M1/50‑1 (MQ=255)                                                          gcgAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTTGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGcc                                                                                          >  1:786152/1‑150 (MQ=255)                                                                tGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCt                                                                                    >  1:1060600/1‑150 (MQ=255)                                                                            ggCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTc                                                                        >  2:1055250/1‑150 (MQ=255)                                                                                        gATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACg                                                            >  2:491836/1‑150 (MQ=255)                                                                                        gATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACg                                                            >  1:1489228/1‑150 (MQ=255)                                                                                        agcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCa                                                                                        >  1:1393790‑M1/63‑122 (MQ=255)                                                                                        agcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCa                                                                                        <  2:1393790‑M1/60‑1 (MQ=255)                                                                                         gcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacCggg                                                                                                                                                >  1:1419446‑M1/62‑65 (MQ=255)                                                                                         gcgcattggcgaggggcgtaaacagggtgaacagctgctgagcctgggcggtgagctgaacCggg                                                                                                                                                <  2:1419446‑M1/4‑1 (MQ=255)                                                                                             gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCAcc                                                                     >  2:230997/1‑136 (MQ=255)                                                                                             gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCAcc                                                                     <  1:230997/136‑1 (MQ=255)                                                                                             gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCAcc                                                                     <  2:519749/136‑1 (MQ=255)                                                                                             gcAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCGGTTCAcc                                                                     >  1:519749/1‑136 (MQ=255)                                                                                              cAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTc                                                      <  1:1548829/150‑1 (MQ=255)                                                                                                    taatTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAAt                                                >  1:713137/1‑150 (MQ=255)                                                                                                       ttGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgg                                                                                                                                                 >  2:1350239/1‑50 (MQ=32)                                                                                                       ttGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgg                                                                                                                                                 <  1:1350239/50‑1 (MQ=32)                                                                                                        tGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCTGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATgcgc                                            <  2:1060600/150‑1 (MQ=255)                                                                                                            ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCt                                                                            >  2:660135/1‑114 (MQ=255)                                                                                                            ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCt                                                                            <  1:660135/114‑1 (MQ=255)                                                                                                            ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCa                                        >  2:1442180/1‑150 (MQ=255)                                                                                                            ccGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCACAAGCGGCAATCGATCCCAGACCCTAAACGATCGCACCTACCACTTCTACTCGCCGCGCGGGCTCAGCAGCTCTTCACCCTGTTTACGCCCCTCGCCCATGCGCTGCa                                        >  2:596050/1‑150 (MQ=21)                                                                                                             cGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCa                                                                                               >  2:856911/1‑94 (MQ=255)                                                                                                             cGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCa                                                                                               <  1:856911/94‑1 (MQ=255)                                                                                                                    aacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTcagca                                                                               >  1:354276/1‑103 (MQ=255)                                                                                                                    aacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTcagca                                                                               <  2:354276/103‑1 (MQ=255)                                                                                                                       gTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCGCCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCAcc                                                                     <  2:1193801/110‑1 (MQ=255)                                                                                                                       gTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCAcc                                                                     >  1:1193801/1‑110 (MQ=255)                                                                                                                             gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCAcc                                                                                                              <  2:651410/63‑1 (MQ=255)                                                                                                                             gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCAcc                                                                                                              >  1:651410/1‑63 (MQ=255)                                                                                                                             gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTc                                                      <  2:1391976/119‑1 (MQ=255)                                                                                                                             gCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTc                                                      >  1:1391976/1‑119 (MQ=255)                                                                                                                                ggTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTc                                 <  2:376587/137‑1 (MQ=255)                                                                                                                                ggTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTc                                 >  1:376587/1‑137 (MQ=255)                                                                                                                                 gTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGt                   >  2:1360908/1‑150 (MQ=255)                                                                                                                                      cccGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATc              <  1:214217/150‑1 (MQ=255)                                                                                                                                           taaGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTc                              >  1:714325/2‑129 (MQ=255)                                                                                                                                           taaGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTc                              <  2:714325/128‑1 (MQ=255)                                                                                                                                           gAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgctc         <  1:792913/150‑1 (MQ=255)                                                                                                                                              gcgcCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCcgctcgct      <  2:859132/150‑1 (MQ=255)                                                                                                                                                  cgcgcgGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTgg  <  1:596050/150‑1 (MQ=255)                                                                                                                                                     cCGCGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCt                                >  2:578151‑M1/2‑117 (MQ=255)                                                                                                                                                     cCGCGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCt                                <  1:578151‑M1/116‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                  GGCCGGGCTGGCCAGCAGTAGGAACAGCATGAAAAACAGGCGGCGCATGGCGGACTCGCGAGGTGGAACGTGCCCGGCATGATAACGGATGCGCAGGAATAATTGGCCCGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCAGACCCTGAACGCTCGCACCGCCCGGTTCAGCTCACCGCCCAGGCTCAGCAGCTGTTCACCCTGTTTACGCCCCTCGCCAATGCGCTGCAGGTTGTCTTCACCCAGTTCGTGAATCCGCTCGCTGTGG  >  NC_002947/652619‑652913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.